LOCUS CEU29515 3091 bp DNA INV 24-MAR-1998
DEFINITION Caenorhabditis elegans sex-determining (fem-2) gene, complete cds.
ACCESSION U29515
VERSION U29515.1 GI:903678
KEYWORDS .
SOURCE Caenorhabditis elegans.
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida;
Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.
REFERENCE 1 (bases 1 to 3091)
AUTHORS Pilgrim,D., McGregor,A., Jackle,P., Johnson,T. and Hansen,D.
TITLE The C. elegans sex-determining gene fem-2 encodes a putative
protein phosphatase
JOURNAL Mol. Biol. Cell 6 (9), 1159-1171 (1995)
MEDLINE 96079263
REFERENCE 2 (bases 1 to 3091)
AUTHORS Pilgrim,D.B.
TITLE Direct Submission
JOURNAL Submitted (19-JUN-1995) Dave B. Pilgrim, Biological Sciences,
University of Alberta, CW405 Biological Sciences Building,
Edmonton, Alberta T6G 2E9, Canada
REFERENCE 3 (bases 1 to 3091)
AUTHORS Pilgrim,D.B.
TITLE Direct Submission
JOURNAL Submitted (24-MAR-1998) Dave B. Pilgrim, Biological Sciences,
University of Alberta, CW405 Biological Sciences Building,
Edmonton, Alberta T6G 2E9, Canada
REMARK Amino acid sequence updated by submitter
FEATURES Location/Qualifiers
source 1..3091
/organism="Caenorhabditis elegans"
/strain="Bristol (N2)"
/db_xref="taxon:6239"
/map="LG III left -26.91"
mRNA join(245..337,392..731,1143..1339,1390..1999,2299..2854)
/gene="fem-2"
/product="putative protein phosphatase"
gene 245..2854
/gene="fem-2"
CDS join(299..337,392..731,1143..1339,1390..1999,2299..2462)
/gene="fem-2"
/note="putative protein phosphatase"
/codon_start=1
/function="sex-determination"
/protein_id="AAC06328.1"
/db_xref="GI:2981632"
/translation="MEKVNEERDAVFEDHIGDRRRSVRSLLEEAFADEMEKTSYDVEV
ADTPQPHIPIRFRHPPIAGPVHDVFGDAIHDIFQKMMKRGQAVDFCHWVSHLIATEID
EKFSEVAFRDVQYNPDIYVTDSTTEAKKLFNDKIWPAIDKILQQNAETCPILSEKWSG
IHVSGDQLKGQRHKQEDRFLAYPNGQYMDRGEDPISVLAVFDGHGGHECSQYAAGHLW
ETWLEVRKSRDPSDSLEDQLRKSLELLDERMTVRSVKECWKGGSTAVCCAIDMDQKLM
ALAWLGDSPGYVMSNIEFRQLTRGHSPSDEREARRVEEAGGQLFVIGGELRVNGVLNL
TRALGDVPGRPMISNEPETCQVPIESSDYLVLLACDGISDVFNERDLYQLVEAFANDY
PVEDYAELSRFICTKAIEAGSADNVSVVIGFLRPPQDVWKLMKHESDDEDSDVTDEE"
polyA_site 2854
/gene="fem-2"
BASE COUNT 899 a 586 c 644 g 962 t
ORIGIN
1 tttttgatcc atttttgatt tgataaaaat gttattaata caatacaatg cgaattaaat
61 taatatttcg cgcgagaaac gcgcaacgca ccgaaagtgc gcaaacgaga agctttgcgc
121 gtttctggtg cagaaaattc tgcattattt ttttgttgat ttttcctcat tttgtgttga
181 aatccattgt tttttctcgg tttttctctg atttttatgt taaaaacaat tattgaaatg
241 tcagatcaac ccagctgtcc caccgaagcc ggtagtggtt ttaaaactgg aaaaatacat
301 ggaaaaagta aacgaggagc gggatgcggt tttcgaggta gaaaacggga ttttatatat
361 ttaatgctag ttagaaaaat gtatattcca ggatcacatc ggcgatcgcc gtcgaagtgt
421 ccggtcactt ctggaggagg catttgcaga tgaaatggag aaaactagct atgacgtcga
481 ggttgccgac actccacaac cgcatattcc aatacgtttc cgtcatccac caatcgccgg
541 accagttcat gatgttttcg gagacgcgat tcacgacatt ttccagaaaa tgatgaaaag
601 aggccaggcg gtcgactttt gtcactgggt gtctcacttg atcgccacag aaattgacga
661 gaaattcagt gaagttgcgt tcagagatgt tcagtataat cctgatattt atgttaccga
721 tagtaccaca ggtaattatt aaatgtgcaa aatctgctat taatttagca gaccaagcat
781 gggcctgcta aatattcagc aggcctatcc ccattggtct gctaaatatt tagcatacct
841 aacttgggtc tgctaaatat ttagcagacc atccccattg gtctgctaat tatttagcag
901 accaactatg ggtctgctaa ttatttagca gaccacctat gggtctgcta aaatatttag
961 catacctacc atgagtctgc taaatattta gcagacctat cctcattggt ctgctaaata
1021 tttttagctg gccattcccc attgatctgc taatttttgc aaaaataaaa cttgttaaat
1081 agaattttta aaaaatcttc aaaaactcaa cacttctgtt catcaataca acttattttc
1141 agaagccaaa aagctattca acgacaaaat ttggccggcg atcgacaaga ttctccagca
1201 aaacgccgaa acgtgcccga ttctgtctga aaagtggtct ggaatccacg tgtcgggcga
1261 tcaactgaaa gggcaacgtc acaagcaaga agatcggttt ttggcgtatc ctaatgggca
1321 atatatggat cgtggagagg tttaggagga ttttaggcct ggaaaattac tgaaaaatga
1381 aatttttagg atccaatttc ggtgttagcg gtgttcgatg gtcacggtgg tcacgagtgc
1441 tctcagtacg cagccgggca cctttgggag acatggttgg aggttcgaaa atcgcgagat
1501 ccttcagata gcctcgaaga tcagcttcgc aagtcgctgg agcttctcga cgaacgaatg
1561 actgtcagaa gtgtgaaaga gtgttggaag ggtggaagta cagctgtctg ctgtgcaatc
1621 gacatggatc agaagcttat ggcgctggcg tggctcggtg actcacccgg atacgtcatg
1681 tcgaacattg aattccgtca gttgacacgt ggacactcgc catccgatga acgggaagct
1741 cggcgtgttg aggaagctgg cggccagctt tttgtgattg gaggcgaatt gcgggtgaac
1801 ggagttctaa atctcacccg agcactcgga gatgttcctg gacggccgat gatctctaat
1861 gaaccggaaa cgtgtcaggt gcctattgaa agctcggatt atctggtgct cctggcttgt
1921 gatggaattt ctgatgtttt caacgagcgt gacctgtacc agttggtgga ggcatttgcg
1981 aatgattatc ctgttgaagg ttaataaaaa ttcttggaga aaaactaaat ttccaaagcc
2041 aaaaatcatt ttttcgtttt ttttttctga aaaaaatcag aagattggct atttctcggg
2101 ggttttcaaa aaaaaaaagt aaagattttc gaattattgt attttttaaa aaagaaaatc
2161 gtgaatttac taaaatttga aaaaatcaat ttttaaaaaa accattcaaa attattttta
2221 aggtaaaaaa cattagccga cgttacttta ttttttaatg tagaaaattc tttaaaaatc
2281 gaaaaaaaat tttttcagac tacgcggagc tctcccgttt catctgtaca aaagcgattg
2341 aggctggaag tgccgacaac gtgtctgttg tgattggctt tttgcgtcca ccgcaggatg
2401 tgtggaagct tatgaaacat gaatcagacg atgaagattc cgatgtcact gatgaggaat
2461 aactgctttt cggtggaaat tttgcctgaa aattgggaaa attcttgcta aacttcggtt
2521 gattttctca aatttttgtc gttttttttc ctaattttcg gtcgatttta tcaaattttc
2581 ccctgttttc ctgtgtctat ttgttttttg ggtattccaa ttttctctct cctattcacc
2641 atatcgtcgt catttctccc cgttatctag cagctttccg tgacccacac acatattttt
2701 gttctcggtg ttcctgtagc atttcacatt tacatacgtt tccaaccagt tggcatccca
2761 ccaaaaatcc gagtactttc cttctcctcc tccacttgaa catatatttg atttgaattt
2821 attttatgat ataaattgta taatgacgtg gaattactgg gatattgagt agctgaatag
2881 gttttgagac acttttgaca ctgatttcat aatgactgta actttcaact cgtgaaaatg
2941 taaaaatcgg agtataccag tcattttcag tagaaaatct ccttttcaat tgaaaatccg
3001 ggatttttcg aaagaaaagc tcgaaaacac cgcgaaaaaa tgattaaaaa agtcatattt
3061 tcaagaggga atttcaaatt tcccgcttac a
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