NGS QC Toolkit & FastQC
ØNGS QC Toolkit is for quality check and filtering of high-quality read
Ø
ØThis toolkit is a standalone and open source application freely available at http://www.nipgr.res.in/ngsqctoolkit.html
Ø
ØApplication have been implemented in Perl programming language
Ø
ØQC of sequencing data generated using Roche 454 and Illumina platforms
Ø
ØAdditional tools to aid QC :  (sequence format converter and trimming tools) and analysis (statistics tools)
Ø
FastQC can be used only for preliminary analysis