1.long-orfs
–This program identifies long,
non-overlapping open reading frames (orfs) in a DNA sequence
file.
2.extract
–This program reads a genome
sequence and a list of coordinates for it and outputs a
multifasta file of the regions specified by the coordinates
3.build-icm
–This program constructs an interpolated context
model (ICM) from an input set of sequences.
4.glimmer3
–
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