•glimmer3.02/scripts/
•
•g3-from-scratch.csh genome.fasta
mygenome
•The script would then run the commands:
–long-orfs -n -t 1.15 genome.fasta
mygenome.longorfs
–extract -t genome.fasta
mygenome.longorfs > mygenome.train
–build-icm -r mygenome.icm <
mygenome.train
–glimmer3 -o50 -g110 -t30 genom.seq
mygenome.icm mygenome
•