STEMLOOP of: d00063.gb_pl1  check: 6807  from: 1  to: 121
 
LOCUS       BAERRA        121 bp    rRNA            PLN       03-NOV-1999
DEFINITION  Batrachospermum ectocarpum 5S ribosomal RNA, complete sequence.
ACCESSION   D00063 N00063 X05529
VERSION     D00063.1  GI:220163
KEYWORDS    5S ribosomal RNA.
SOURCE      Batrachospermum ectocarpum rRNA. . . . 

 Minimum Stem: 6  Minimum bonds/stem: 12  Maximum loop size: 20
 Stems found: 10  Stems shown: 10
 Average Match: 1.80  Average Mismatch: 0.00  Nibbling Threshold:  1

                           April 14, 2000 21:18  ..

     13 AGTACGAGG  ACATGCGC    9, 19
        ||| |||||          A
     47 TCAAGCTCT  ACCCGAGG    17

     21 GACATGCGC  AG    9, 18
        || ||| ||  
     42 CTCTACCCG  AG    4

     30 AGGAG  CCCAT    5, 13
        |||||       C
     50 TCCTC  AAGCT    11

     49 CTCAGC  TAAATCCC    6, 13
        || |||          G
     77 GATTCG  CACGCACT    17

     59 TCCCGTC  ACGCACGCT    7, 14
        |||| ||  
     90 GGGGAGG  CCTCATGAT    18

     59 TCCCGTC  ACGCACGCT    7, 15
        |||| ||           T
     91 GGGGGAG  GCCTCATGA    19

     77 GTACTCC  G    7, 15
        || ||||   G
     93 CAGGGGG  A    3

     80 CTCCGGAG  GG    8, 15
        | |||  |    G
    100 GTGGCACC  AG    5

     83 CGGAGG  GG    6, 12
        | | ||  
     98 GGCACC  AG    4

     94 CACGGT  G    6, 12
        | ||||   G
    108 GCGCTA  A    3