Command Mode
EDit
seqname
- get a new sequence file to edit
[n] Include [seqname] - insert another sequence [at position
n]
(SeqEd prompts for range and strand)
s,f Delete
- delete a range of bases
[s] Check [/Blind] - check a range of
bases [beginning at s]
37
- go to base 37
REDraw
- redraw the screen
[n] COmment comment - insert a comment [at
position n]
[n] COmment
- enter comment editing mode [at position n]
[n] HEAding
- edit documentary heading [at line n]
change
- enter screen mode (<Return> is sufficient)
screen
- enter screen mode (<Return> is sufficient)
OVERstrike - enter
overstrike mode
INSert
- enter insert mode
[n] Mark markcharacter - mark the
sequence [at position n]
PERFect
- require finds to be perfect matches
PROtein
- set sequence type to PROTEIN
NUCleotide - set sequence
type to NUCLEOTIDE
[s,f] Write [seqname] - write [a part of] the
sequence to a file
DIGitizer - enter
digitizer mode
RELoad
- enter reload mode
ACCept
- terminate reload mode
Help
- show commands in screen and command modes
[s,f] EXit [seqname] - write [a
part of] the sequence and quit
Quit
- quit the editor without writing the sequence
[n] indicates an optional parameter.
s and f are numbers for start and finish of a
range of interest