BLAST Alignments for npm_human.sw
P06748 homo sapiens (human). nucleophosmin (npm)
(nucleolar phosphoprotein b23) (numatrin) (nucleolar
protein no38). 7/1998
Length = 294
Score = 486 bits (1238), Expect = e-137
Identities = 247/294 (84%), Positives = 247/294 (84%)
Query: 1 MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 60
MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV
Sbjct: 1 MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 60
Query: 61 EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLXXXX 120
EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL
Sbjct: 61 EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVE 120
Query: 121 XXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXXXX 180
KLLSISGKRSAPGGGSKVPQKKVKL
Sbjct: 121 EDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVKLAADEDDDDDDEEDDDEDDDDDD 180
Query: 181 XXXXXXXXKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKG 240
KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKG
Sbjct: 181 FDDEEAEEKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKG 240
Query: 241 PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 294
PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL
Sbjct: 241 PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 294
P13084 rattus norvegicus (rat). nucleophosmin (npm)
(nucleolar phosphoprotein b23) (numatrin) (nucleolar
protein no38). 12/1998
Length = 292
Score = 467 bits (1188), Expect = e-131
Identities = 240/294 (81%), Positives = 243/294 (82%), Gaps = 2/294 (0%)
Query: 1 MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 60
MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV
Sbjct: 1 MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 60
Query: 61 EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLXXXX 120
EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL
Sbjct: 61 EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVE 120
Query: 121 XXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXXXX 180
KLL +SGKRSAPGGG+KVPQKKVKL
Sbjct: 121 EDAESEDEDEEDVKLLGMSGKRSAPGGGNKVPQKKVKLDEDDDEDDEDDEDDEDDDDDDF 180
Query: 181 XXXXXXXXKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKG 240
K PVKKS+RDTPAKNAQKSNQNGKD KPS TPRSKGQESFKKQEKTPKTPKG
Sbjct: 181 DEEETEE-KVPVKKSVRDTPAKNAQKSNQNGKDLKPS-TPRSKGQESFKKQEKTPKTPKG 238
Query: 241 PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 294
PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL
Sbjct: 239 PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 292
Q61937 mus musculus (mouse). nucleophosmin (npm)
(nucleolar phosphoprotein b23) (numatrin) (nucleolar
protein no38). 11/1997
Length = 292
Score = 467 bits (1188), Expect = e-131
Identities = 240/294 (81%), Positives = 243/294 (82%), Gaps = 2/294 (0%)
Query: 1 MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 60
MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV
Sbjct: 1 MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 60
Query: 61 EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLXXXX 120
EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL
Sbjct: 61 EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVE 120
Query: 121 XXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXXXX 180
KLL +SGKRSAPGGG+KVPQKKVKL
Sbjct: 121 EDAESEDEDEEDVKLLGMSGKRSAPGGGNKVPQKKVKLDEDDEDDDEDDEDDEDDDDDDF 180
Query: 181 XXXXXXXXKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKG 240
K PVKKS+RDTPAKNAQKSNQNGKD KPS TPRSKGQESFKKQEKTPKTPKG
Sbjct: 181 DEEETEE-KVPVKKSVRDTPAKNAQKSNQNGKDLKPS-TPRSKGQESFKKQEKTPKTPKG 238
Query: 241 PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 294
PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL
Sbjct: 239 PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 292
P16039 gallus gallus (chicken). nucleophosmin (npm)
(nucleolar phosphoprotein b23) (numatrin) (nucleolar
protein no38). 11/1997
Length = 294
Score = 330 bits (838), Expect = 4e-90
Identities = 179/298 (60%), Positives = 210/298 (70%), Gaps = 8/298 (2%)
Query: 1 MEDS-MDMD-MSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELH 58
MEDS MDM+ M PLRPQ +LFGCELKA+K+Y FKVD++ENEHQLSLRTV+LGAGAKDELH
Sbjct: 1 MEDSAMDMESMGPLRPQTFLFGCELKAEKEYQFKVDDEENEHQLSLRTVTLGAGAKDELH 60
Query: 59 IVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLXX 118
+VEAEA++YEG+P KV LA+LKMSVQPTVSLGGFEITPP VLRLKCGSGPV++SGQHL
Sbjct: 61 VVEAEALDYEGNPTKVVLASLKMSVQPTVSLGGFEITPPFVLRLKCGSGPVYVSGQHL-V 119
Query: 119 XXXXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXX 178
K+ + S KR A GGG+K PQKK KL
Sbjct: 120 ALEEEPESEDEEEDTKIGNASTKRPASGGGAKTPQKKPKL--SEDDEDDDEDEDDDEDDE 177
Query: 179 XXXXXXXXXXKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEK--TPK 236
K P+KK R+ KN QK+ QNGKDSKP STP SK + K++K TPK
Sbjct: 178 DDLDDDEEEIKTPMKKPAREPAGKNMQKAKQNGKDSKP-STPASKTKTPDSKKDKSLTPK 236
Query: 237 TPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 294
TPK P S+E+IKAKMQAS++KG SLPK+E KF NYVKNCFR DQ+ IQ LWQWR++L
Sbjct: 237 TPKVPLSLEEIKAKMQASVDKGCSLPKLEPKFANYVKNCFRTEDQKVIQALWQWRQTL 294
P07222 xenopus laevis (african clawed frog).
nucleophosmin (npm) (nucleolar phosphoprotein b23)
(numatrin) (nucleolar protein no38). 11/1997
Length = 299
Score = 300 bits (760), Expect = 6e-81
Identities = 169/302 (55%), Positives = 197/302 (64%), Gaps = 15/302 (4%)
Query: 1 MEDSMDMD-MSPLRPQNYLFGCELKADK-DYHFKVDNDENEHQLSLRTVSLGAGAKDELH 58
MEDSMDMD ++PLRPQN+LFGCELKADK +Y FKV++DENEHQLSLRTVSLGA AKDELH
Sbjct: 1 MEDSMDMDNIAPLRPQNFLFGCELKADKKEYSFKVEDDENEHQLSLRTVSLGASAKDELH 60
Query: 59 IVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLXX 118
+VEAE +NYEG IK+ LA+LK SVQPTVSLGGFEITPPV+LRLK GSGPV++SGQHL
Sbjct: 61 VVEAEGINYEGKTIKIALASLKPSVQPTVSLGGFEITPPVILRLKSGSGPVYVSGQHLVA 120
Query: 119 XXXXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXX 178
+ KR AP SKVP+KK +L
Sbjct: 121 LEDLESSDDEDEEHEPSPK-NAKRIAPDSASKVPRKKTRL---EEEEEDSDEDDDDDEDD 176
Query: 179 XXXXXXXXXXKAPVKKSIRDTPAKNAQKSNQNGKDS------KPSSTPRSKGQESFKKQE 232
+ PVKK+ T +K AQK N NGK S K TP KG++ K Q
Sbjct: 177 DDEDDDEEEEETPVKKT-DSTKSKAAQKLNHNGKASALSTTQKTPKTPEQKGKQDTKPQ- 234
Query: 233 KTPKTPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRK 292
TPKTPK P S E+IKAKMQ +EKG LPKVE KF NYVKNCFR +Q+ I+DLW+WR+
Sbjct: 235 -TPKTPKTPLSSEEIKAKMQTYLEKGNVLPKVEVKFANYVKNCFRTENQKVIEDLWKWRQ 293
Query: 293 SL 294
SL
Sbjct: 294 SL 295
Q91802 xenopus laevis (african clawed frog). no38.
11/1998
Length = 296
Score = 300 bits (759), Expect = 8e-81
Identities = 169/302 (55%), Positives = 198/302 (64%), Gaps = 18/302 (5%)
Query: 1 MEDSMDMD-MSPLRPQNYLFGCELKAD-KDYHFKVDNDENEHQLSLRTVSLGAGAKDELH 58
MEDSMDMD ++PLRPQN+LFGCELK D K+Y FKVD DENEHQLSLRTVSLGA AKDELH
Sbjct: 1 MEDSMDMDTIAPLRPQNFLFGCELKGDKKEYSFKVD-DENEHQLSLRTVSLGASAKDELH 59
Query: 59 IVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLXX 118
+VEAE +NYEG IK+ LA+LK SVQPTVSLGGFEITPPV+LRLK GSGPV++SGQHL
Sbjct: 60 VVEAEGINYEGKTIKIALASLKPSVQPTVSLGGFEITPPVILRLKSGSGPVYVSGQHLVA 119
Query: 119 XXXXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXX 178
+ KR+AP SKVP KK +L
Sbjct: 120 LEDLESSDEDDDEQIPSPK-NAKRAAPNAASKVPLKKTRL------EEEADSDEEDNDDD 172
Query: 179 XXXXXXXXXXKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRS------KGQESFKKQE 232
+ PVKK+ T +K AQK N NGK S+ S+TP++ KG++ K Q
Sbjct: 173 VDDEVDEEEEETPVKKTDLSTKSKVAQKLNHNGKASELSATPKTPKTPEQKGKQDTKSQ- 231
Query: 233 KTPKTPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRK 292
TPKTPK P S E++KAKMQ +EKG LPKVE KF NYVKNCFR Q+ IQDLW+WR+
Sbjct: 232 -TPKTPKTPLSFEEMKAKMQTILEKGTVLPKVEVKFANYVKNCFRTDSQKVIQDLWKWRQ 290
Query: 293 SL 294
SL
Sbjct: 291 SL 292
O42584 xenopus laevis (african clawed frog). nova.
8/1998
Length = 183
Score = 106 bits (262), Expect = 1e-22
Identities = 55/103 (53%), Positives = 72/103 (69%), Gaps = 2/103 (1%)
Query: 15 QNYLFGCELKAD-KDYHFKV-DNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPI 72
++YLFGCEL + K Y F+V + D+ H + L+T+SLGAGAKDE ++VE A NY+ +
Sbjct: 19 ESYLFGCELSSKTKQYTFEVNEEDDAVHLVCLQTISLGAGAKDEHNVVEVTAPNYQNKEV 78
Query: 73 KVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQH 115
V LA LK+S QP V++G FEI PV RL GSGPV ISG+H
Sbjct: 79 TVPLANLKLSCQPMVNVGYFEIEAPVTFRLTSGSGPVFISGRH 121
P05221 xenopus laevis (african clawed frog).
nucleoplasmin. 7/1998
Length = 200
Score = 105 bits (260), Expect = 2e-22
Identities = 56/107 (52%), Positives = 75/107 (69%), Gaps = 4/107 (3%)
Query: 13 RPQNYLFGCEL-KADKDYHFKVDNDEN--EHQLSLRTVSLGAGAKDELHIVEAEAMNYEG 69
+P + ++GCEL + DK + FKV++DE EHQL+LRTV LG AKDE +IVE EG
Sbjct: 13 KPVSLIWGCELNEQDKTFEFKVEDDEEKCEHQLALRTVCLGDKAKDEFNIVEIVTQE-EG 71
Query: 70 SPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL 116
+ V +ATLK S+ P ++ G E+TPPV RLK GSGP++ISGQH+
Sbjct: 72 AEKSVPIATLKPSILPMATMVGIELTPPVTFRLKAGSGPLYISGQHV 118
O75607 homo sapiens (human). nucleoplasmin-3. 11/1998
Length = 178
Score = 96.3 bits (236), Expect = 2e-19
Identities = 49/108 (45%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Query: 10 SPLRPQNYLFGCELKAD-KDYHFKVDN-DENEHQLSLRTVSLGAGAKDELHIVEAEAMNY 67
+P+ ++ FGCEL + + FKV+ D+ EH L+L + L GAKDE ++VE A N+
Sbjct: 30 APVTMDSFFFGCELSGHTRSFTFKVEEEDDAEHVLALTMLCLTEGAKDECNVVEVVARNH 89
Query: 68 EGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQH 115
+ I V +A LK+S QP +SL F++ PPV RLK GSGPV I+G+H
Sbjct: 90 DHQEIAVPVANLKLSCQPMLSLDDFQLQPPVTFRLKSGSGPVRITGRH 137
P91753 lytechinus pictus (painted sea urchin). mitotic
apparatus protein p62. 8/1998
Length = 411
Score = 62.1 bits (148), Expect = 3e-09
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 14/114 (12%)
Query: 15 QNYLFGCELKADK---------DYHFKVDNDENE---HQLSLRTVSLGAGAKDE-LHIVE 61
+ Y +G L DK D+ D+DE + H L L+ LG AKD+ +++E
Sbjct: 3 KEYFWGATLSKDKKIFKWDPESDFLDDEDDDEEDSISHFLFLKQAVLGVNAKDDDRNVIE 62
Query: 62 AEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQH 115
E +N++G + L +L++ + + +L + PPV +L GSGPV++SGQH
Sbjct: 63 VETINFDGETVIQPLLSLRLGLNESTNLD-IGLQPPVTFKLALGSGPVYLSGQH 115
Score = 54.7 bits (129), Expect = 6e-07
Identities = 36/94 (38%), Positives = 51/94 (53%), Gaps = 14/94 (14%)
Query: 200 PAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKGG 259
PAK A K NG +KP TP+S+ + K+ K S+ED+K + K
Sbjct: 326 PAKKA-KGKVNGT-AKPKGTPKSQANKGMKE--------KKTYSLEDMKQ----DLIKSP 371
Query: 260 SLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKS 293
S PK E KF N+VK+ F +++ + IQ+LW W KS
Sbjct: 372 SKPKKEEKFKNFVKSKFHLSEGKKIQELWGWYKS 405
Q94555 drosophila virilis (fruit fly). histone h1.2.
11/1998
Length = 250
Score = 38.3 bits (87), Expect = 0.047
Identities = 34/139 (24%), Positives = 51/139 (36%), Gaps = 6/139 (4%)
Query: 136 LSISGKRSAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAPVKKS 195
LS S K+ S V +K K+ AP KKS
Sbjct: 116 LSRSAKKDPKPKASAVEKKTKKVNASAARATKKKSSTSTTKKAAGAADKKLSKSAPTKKS 175
Query: 196 IRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKT-PKTPKGPSSVEDIKAKMQAS 254
+ A A+ KD+K + T ++K + K T PKTPK + K + A+
Sbjct: 176 VEKKRADKAK-----AKDAKKTGTIKAKPTTAKAKSSATKPKTPKPKTKSAKPKKVVSAT 230
Query: 255 IEKGGSLPKVEAKFINYVK 273
K ++ K +AK + K
Sbjct: 231 TPKKTAVKKPKAKTASATK 249
Q17362 caenorhabditis elegans. unc-89. 11/1998
Length = 6632
Score = 36.7 bits (83), Expect = 0.14
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 189 KAPVKK--SIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVED 246
K+PVKK S K A + + KP+S P K + K K K+P+ S VE+
Sbjct: 1558 KSPVKKEKSPEKVEEKPASPTKKEKSPEKPAS-PTKKSENEVKSPTKKEKSPE-KSVVEE 1615
Query: 247 IKAKMQASIEKGGSLPKVEAK 267
+K+ + S EK PK K
Sbjct: 1616 LKSPKEKSPEKADDKPKSPTK 1636
Score = 35.6 bits (80), Expect = 0.31
Identities = 19/68 (27%), Positives = 33/68 (47%), Gaps = 6/68 (8%)
Query: 189 KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTP----KGPSSV 244
K+P + ++ K S+ K+ PSS + G E K++ PK+P K P
Sbjct: 1420 KSPAAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKTGDE--VKEKSPPKSPTKKEKSPEKP 1477
Query: 245 EDIKAKMQ 252
ED+K+ ++
Sbjct: 1478 EDVKSPVK 1485
Score = 32.5 bits (72), Expect = 2.7
Identities = 27/101 (26%), Positives = 44/101 (42%), Gaps = 22/101 (21%)
Query: 189 KAPVKKSIRDTPAKNAQKSNQNGKDSKPS------STPRSKGQESFK---KQEKTPKT-- 237
K+P K + D + ++ + + KP+ S+P K + K K+EK+P+T
Sbjct: 1639 KSPEKSATEDVKSPTKKEKSPEKVEEKPTSPTKKESSPTKKTDDEVKSPTKKEKSPQTVE 1698
Query: 238 --PKGP---------SSVEDIKAKMQASIEKGGSLPKVEAK 267
P P S VE++K+ + S EK PK K
Sbjct: 1699 EKPASPTKKEKSPEKSVVEEVKSPKEKSPEKAEEKPKSPTK 1739
O01761 caenorhabditis elegans. c. elegans unc-89
(gb:u33058) (nid:g1160355). 11/1998
Length = 6642
Score = 36.7 bits (83), Expect = 0.14
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 189 KAPVKK--SIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVED 246
K+PVKK S K A + + KP+S P K + K K K+P+ S VE+
Sbjct: 1558 KSPVKKEKSPEKVEEKPASPTKKEKSPEKPAS-PTKKSENEVKSPTKKEKSPE-KSVVEE 1615
Query: 247 IKAKMQASIEKGGSLPKVEAK 267
+K+ + S EK PK K
Sbjct: 1616 LKSPKEKSPEKADDKPKSPTK 1636
Score = 35.6 bits (80), Expect = 0.31
Identities = 19/68 (27%), Positives = 33/68 (47%), Gaps = 6/68 (8%)
Query: 189 KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTP----KGPSSV 244
K+P + ++ K S+ K+ PSS + G E K++ PK+P K P
Sbjct: 1420 KSPAAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKTGDE--VKEKSPPKSPTKKEKSPEKP 1477
Query: 245 EDIKAKMQ 252
ED+K+ ++
Sbjct: 1478 EDVKSPVK 1485
Score = 32.5 bits (72), Expect = 2.7
Identities = 27/101 (26%), Positives = 44/101 (42%), Gaps = 22/101 (21%)
Query: 189 KAPVKKSIRDTPAKNAQKSNQNGKDSKPS------STPRSKGQESFK---KQEKTPKT-- 237
K+P K + D + ++ + + KP+ S+P K + K K+EK+P+T
Sbjct: 1639 KSPEKSATEDVKSPTKKEKSPEKVEEKPTSPTKKESSPTKKTDDEVKSPTKKEKSPQTVE 1698
Query: 238 --PKGP---------SSVEDIKAKMQASIEKGGSLPKVEAK 267
P P S VE++K+ + S EK PK K
Sbjct: 1699 EKPASPTKKEKSPEKSVVEEVKSPKEKSPEKAEEKPKSPTK 1739
Q94972 drosophila virilis (fruit fly). histone h1.3.
11/1998
Length = 250
Score = 36.4 bits (82), Expect = 0.18
Identities = 34/139 (24%), Positives = 53/139 (37%), Gaps = 6/139 (4%)
Query: 136 LSISGKRSAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAPVKKS 195
LS S K+ A S V +K K+ A KK+
Sbjct: 116 LSRSAKKDAKPKASAVEKKTKKVNASAAAATKRSSSTSTTKKAAGAADKKLSKSAAAKKN 175
Query: 196 IRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKT-PKTPKGPSSVEDIKAKMQAS 254
+ K A K + KD+K + T ++K + K T PKTPK ++ K + A+
Sbjct: 176 VEK---KKADK--EKAKDAKKTGTIKAKLTTAKAKSSATKPKTPKPKTTSAKPKKVVSAT 230
Query: 255 IEKGGSLPKVEAKFINYVK 273
K ++ K +AK + K
Sbjct: 231 TPKKTAVKKPKAKTASATK 249
P16884 rattus norvegicus (rat). neurofilament triplet h
protein (200 kd neurofilament protein) (nf-h)
(fragment). 11/1997
Length = 831
Score = 36.0 bits (81), Expect = 0.24
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 189 KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPK-----TPKGPSS 243
K P K S ++ P K + KD+K T SK +E K E K P+ PS
Sbjct: 739 KEPSKPSEKEKPKKEEVPAAPEKKDTKEEKTTESKKREEKPKMEAKAKEEDKGLPQEPSK 798
Query: 244 VEDIKAKMQASIEKGGSLPKVEA 266
+ KA+ +S ++ S P +A
Sbjct: 799 PKTEKAEKSSSTDQKDSQPSEKA 821
Score = 31.3 bits (69), Expect = 6.1
Identities = 20/67 (29%), Positives = 29/67 (42%), Gaps = 1/67 (1%)
Query: 191 PVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAK 250
P K TPA + ++ KD P + K +E EK PK G + E+ K K
Sbjct: 650 PKKVEEEKTPATPKTEVKESKKDEAPKEAQKPKAEEKEPLTEK-PKDSPGEAKKEEAKEK 708
Query: 251 MQASIEK 257
A+ E+
Sbjct: 709 KAAAPEE 715
Q24704 drosophila virilis (fruit fly). histone h1.
11/1997
Length = 250
Score = 35.6 bits (80), Expect = 0.31
Identities = 33/139 (23%), Positives = 52/139 (36%), Gaps = 6/139 (4%)
Query: 136 LSISGKRSAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAPVKKS 195
LS S + A S V +K K+ A KK+
Sbjct: 116 LSASANKDAKPKASAVEKKTKKVNASAARATKSKSSTSTTKKAAGAADKKLSKSAAAKKN 175
Query: 196 IRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKT-PKTPKGPSSVEDIKAKMQAS 254
+ K A K + KD+K + T ++K + K T PKTPK ++ K + A+
Sbjct: 176 VEK---KKADK--EKAKDAKKTGTIKAKPTTAKAKSSATKPKTPKPKTTSAKPKKVVSAT 230
Query: 255 IEKGGSLPKVEAKFINYVK 273
K ++ K +AK + K
Sbjct: 231 TPKKTAVKKPKAKTASATK 249
Q27415 drosophila melanogaster (fruit fly). crp1
protein. 11/1996
Length = 152
Score = 35.6 bits (80), Expect = 0.31
Identities = 31/101 (30%), Positives = 50/101 (48%), Gaps = 6/101 (5%)
Query: 19 FGCELKADKD-YHFKVDNDENEHQ-LSLRTVSLGAGAKD-ELHIVEAEAMNYEGSPIKVT 75
+G L A+ D + VD D Q L ++ + LGA AK+ E ++VE +N +++
Sbjct: 7 YGVTLTAESDSVTWDVDEDYARGQKLVIKQILLGAEAKENEFNVVE---VNTPKDSVQIP 63
Query: 76 LATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL 116
+A LK V+ V +L GSGPV+I G ++
Sbjct: 64 IAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPVYIHGHNI 104
O65794 triticum aestivum (wheat). histone h1. 11/1998
Length = 284
Score = 35.2 bits (79), Expect = 0.41
Identities = 22/79 (27%), Positives = 39/79 (48%), Gaps = 3/79 (3%)
Query: 191 PVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAK 250
PV ++ D PA +A+ + +K + TP++K + +K + TP P V + A
Sbjct: 21 PVVETTADAPAGDAKATKATKAKAKAAKTPKAKKPSAPRKPKATPAHPTYAEMVTEAIAA 80
Query: 251 MQASIEKGGSLPKVEAKFI 269
++ E+ GS AK+I
Sbjct: 81 LK---ERNGSSTVAIAKYI 96
Score = 31.7 bits (70), Expect = 4.7
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 189 KAPV--KKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTP-KTPKGPSSVE 245
KAP KK PAK + + KP++ +K + + K + K P KT K + +
Sbjct: 136 KAPAAPKKPKTKAPAKKKPAAKKKAPAKKPAAKSPAKKKPAAKPKAKAPAKTTKAAAKPK 195
Query: 246 -DIKAKMQASIEKGGSLPKVEAK 267
KAK A K + PK AK
Sbjct: 196 AAAKAKAPAKTTKAAAKPKPAAK 218
O77788 bos taurus (bovine). neurofilament-m subunit
(fragment). 11/1998
Length = 810
Score = 35.2 bits (79), Expect = 0.41
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 189 KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTP--KTPKGPSSVED 246
K+P KS P + + S + +P +K + K+P K+P S VE+
Sbjct: 528 KSPTAKS----PTAKSPVAKSPTAKSPEAKSPEAKSPTAKSPTAKSPAAKSPAPKSPVEE 583
Query: 247 IKAKMQASIEKGGSLPKVE 265
+K K +A EKG KVE
Sbjct: 584 VKPKAEAGAEKGEQKEKVE 602
P10412 homo sapiens (human). histone h1b (h1.4).
6/1994
Length = 218
Score = 34.8 bits (78), Expect = 0.54
Identities = 27/84 (32%), Positives = 42/84 (49%), Gaps = 7/84 (8%)
Query: 189 KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQE--KTPKTPKGPSSVED 246
K P K + TP K+A+K+ + K KP++ +K +S KK + K K PK P+ +
Sbjct: 135 KKPKKATGAATPKKSAKKTPKKAK--KPAAAAGAKKAKSPKKAKAAKPKKAPKSPAKAKA 192
Query: 247 IK---AKMQASIEKGGSLPKVEAK 267
+K AK + + K K AK
Sbjct: 193 VKPKAAKPKTAKPKAAKPKKAAAK 216
O17965 caenorhabditis elegans. m01e5.5b protein.
8/1998
Length = 734
Score = 34.8 bits (78), Expect = 0.54
Identities = 29/108 (26%), Positives = 46/108 (41%), Gaps = 9/108 (8%)
Query: 193 KKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQ------EKTPKTPKGPSSVED 246
K R + AKN +K + G DS+ P K + K+ E + +G S ED
Sbjct: 71 KPEKRKSSAKNGKKKDV-GSDSEDDYKPEKKKSKKNNKKKAQESSEDDDEESEGDVSEED 129
Query: 247 IKAKMQASIEKGGSLPKVEAKFINYVKNC--FRMTDQEAIQDLWQWRK 292
+K + + S S P K K ++ +E I+D+W+W K
Sbjct: 130 VKPQKRKSKGAEKSKPSTSKKDAGGKKEPPKKKVKKEEDIEDIWEWWK 177
P15865 rattus norvegicus (rat). histone h1.2 (h1d).
11/1995
Length = 218
Score = 34.4 bits (77), Expect = 0.70
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 189 KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQE--KTPKTPKGPSSVED 246
K P K + TP K+ +K+ + K KP++ +K +S KK + K K PK P+
Sbjct: 135 KKPKKATGTATPKKSTKKTPKKAK--KPAAAAGAKKAKSPKKAKATKAKKAPKSPAKARA 192
Query: 247 IK---AKMQASIEKGGSLPKVEAK 267
+K AK + S K K AK
Sbjct: 193 VKPKAAKPKTSKPKAAKPKKTAAK 216
Q13061 homo sapiens (human). triadin. 8/1998
Length = 729
Score = 34.4 bits (77), Expect = 0.70
Identities = 20/71 (28%), Positives = 37/71 (51%), Gaps = 5/71 (7%)
Query: 201 AKNAQKSNQNGKDSKPSSTPRSKGQESFKKQE-----KTPKTPKGPSSVEDIKAKMQASI 255
AK +K + K KP+ + KG++ KK++ K+PK S + +KAK + +
Sbjct: 371 AKKDEKKEDSKKTKKPAEVEQPKGKKQEKKEKHVEPAKSPKKEHSVPSDKQVKAKTERAK 430
Query: 256 EKGGSLPKVEA 266
E+ G++ +A
Sbjct: 431 EEIGAVSSKKA 441
Q14529 homo sapiens (human). histone h1.5. 11/1998
Length = 226
Score = 34.4 bits (77), Expect = 0.70
Identities = 25/80 (31%), Positives = 36/80 (44%), Gaps = 3/80 (3%)
Query: 190 APVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKG--PSSVEDI 247
A KK+++ TP K A+K G S ++K KK K+P PK P + +
Sbjct: 146 AGAKKAVKKTP-KKAKKPAAAGVKKVAKSPKKAKAAAKPKKATKSPAKPKAVKPKAAKPK 204
Query: 248 KAKMQASIEKGGSLPKVEAK 267
AK +A+ K K AK
Sbjct: 205 AAKPKAAKPKAAKAKKAAAK 224
Q03111 homo sapiens (human). enl protein. 10/1996
Length = 559
Score = 34.0 bits (76), Expect = 0.92
Identities = 19/64 (29%), Positives = 29/64 (44%), Gaps = 2/64 (3%)
Query: 189 KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIK 248
K P AK +KS+ G S P ++PR+ SF +K P K + E +K
Sbjct: 285 KRPATADSPKPSAKKQKKSSSKGSRSAPGTSPRTSSSSSF--SDKKPAKDKSSTRGEKVK 342
Query: 249 AKMQ 252
A+ +
Sbjct: 343 AESE 346
Q14768 homo sapiens (human). enl protein. 1/1999
Length = 559
Score = 34.0 bits (76), Expect = 0.92
Identities = 19/64 (29%), Positives = 29/64 (44%), Gaps = 2/64 (3%)
Query: 189 KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIK 248
K P AK +KS+ G S P ++PR+ SF +K P K + E +K
Sbjct: 285 KRPATADSPKPSAKKQKKSSSKGSRSAPGTSPRTSSSSSF--SDKKPAKDKSSTRGEKVK 342
Query: 249 AKMQ 252
A+ +
Sbjct: 343 AESE 346
O35482 rattus norvegicus (rat). high molecular-weight
neurofilament. 11/1998
Length = 1072
Score = 34.0 bits (76), Expect = 0.92
Identities = 24/83 (28%), Positives = 37/83 (43%), Gaps = 5/83 (6%)
Query: 189 KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQE-----SFKKQEKTPKTPKGPSS 243
K P K S ++ P K + KD+K T SK E K +E+ P+ PS
Sbjct: 980 KEPSKPSEKEKPKKEEVPAAPEKKDTKEEKTTESKKPEEKPKMQAKAKEEDKGLPQEPSK 1039
Query: 244 VEDIKAKMQASIEKGGSLPKVEA 266
+ KA+ +S ++ S P +A
Sbjct: 1040 PKTEKAEKSSSTDQKDSQPSEKA 1062
Score = 31.7 bits (70), Expect = 4.7
Identities = 25/84 (29%), Positives = 38/84 (44%), Gaps = 8/84 (9%)
Query: 192 VKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEK-----TPKTPKGPSSVED 246
VK TPAK K + + + +P + +S +K+E PK + S VE+
Sbjct: 825 VKSPEAKTPAKEEAKRPADIRSPEQVKSPAKEEAKSPEKEETRTEKVAPKKEEVKSPVEE 884
Query: 247 IKAK---MQASIEKGGSLPKVEAK 267
+KAK + EK + PK E K
Sbjct: 885 VKAKEPPKKVEEEKTPATPKTEVK 908
Score = 31.3 bits (69), Expect = 6.1
Identities = 20/67 (29%), Positives = 29/67 (42%), Gaps = 1/67 (1%)
Query: 191 PVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAK 250
P K TPA + ++ KD P + K +E EK PK G + E+ K K
Sbjct: 891 PKKVEEEKTPATPKTEVKESKKDEAPKEAQKPKAEEKEPLTEK-PKDSPGEAKKEEAKEK 949
Query: 251 MQASIEK 257
A+ E+
Sbjct: 950 KAAAPEE 956
O61215 caenorhabditis elegans. w01b11.1 protein.
11/1998
Length = 128
Score = 33.2 bits (74), Expect = 1.6
Identities = 19/61 (31%), Positives = 28/61 (45%)
Query: 194 KSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQA 253
K + PAK A KS KDS PS+ K + K+ ++ + P S+ K +M
Sbjct: 48 KKFQVQPAKKASKSKSKSKDSSPSNGKEKKKRTKRSGGSKSKESSEPPPSLSAFKWQMAF 107
Query: 254 S 254
S
Sbjct: 108 S 108
Q28688 oryctolagus cuniculus (rabbit). neurofilament-h
(fragment). 11/1998
Length = 511
Score = 33.2 bits (74), Expect = 1.6
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 189 KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIK 248
K+PVK+ + +P K + K + + +P K + K++ K+P+ K P E
Sbjct: 261 KSPVKEEAK-SPEKAKSPVKEEAKSPEKAKSPE-KAKSPVKEEAKSPEKAKSPVKEEAKS 318
Query: 249 AKMQASIEKGGSLPKVEAK 267
+ S EK S K EAK
Sbjct: 319 PEKAKSPEKAKSPVKEEAK 337
Score = 33.2 bits (74), Expect = 1.6
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 189 KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIK 248
K+PVK+ + +P K + K + + +P K + K++ K+P+ K P E
Sbjct: 227 KSPVKEEAK-SPEKAKSPVKEEAKSPEKAKSPE-KAKSPVKEEAKSPEKAKSPVKEEAKS 284
Query: 249 AKMQASIEKGGSLPKVEAK 267
+ S EK S K EAK
Sbjct: 285 PEKAKSPEKAKSPVKEEAK 303
Score = 32.8 bits (73), Expect = 2.1
Identities = 22/79 (27%), Positives = 37/79 (45%), Gaps = 2/79 (2%)
Query: 189 KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIK 248
K+PVK+ + +P K + K + + +P K + K++ K+P+ K P +
Sbjct: 295 KSPVKEEAK-SPEKAKSPVKEEAKSPEKAKSPE-KAKSPVKEEAKSPEKAKSPEKAKSPV 352
Query: 249 AKMQASIEKGGSLPKVEAK 267
+ S EK S K EAK
Sbjct: 353 KEEAKSPEKAKSPVKEEAK 371
Score = 32.5 bits (72), Expect = 2.7
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 189 KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIK 248
K K ++ A+ +D K ++ + +G+E K +EKT K P ED K
Sbjct: 414 KEAPKPAVEKPKESTAEAKKDEAEDKKTAAPAKVEGKEEAKPKEKTEVAKKEP---EDAK 470
Query: 249 AKMQAS-IEKGGSLPKVE 265
AK + EK PK E
Sbjct: 471 AKEPSKPTEKEPEKPKKE 488
Q28687 oryctolagus cuniculus (rabbit). neurofilament-h
(fragment). 11/1998
Length = 606
Score = 33.2 bits (74), Expect = 1.6
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 189 KAPVKKSIRD-----TPAKNAQKSNQNGKDS-KPSSTPRSKGQESFKKQEKTPKTPKGPS 242
K+PVK+ + +P K KS + K K + K + K++ K+P+ K P
Sbjct: 303 KSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPV 362
Query: 243 SVEDIKAKMQASIEKGGSLPKVEAK 267
E + S EK S K EAK
Sbjct: 363 KEEAKSPEKAKSPEKAKSPVKEEAK 387
Score = 32.8 bits (73), Expect = 2.1
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 189 KAPVKKSIRD-----TPAKNAQKSNQNGKDS-KPSSTPRSKGQESFKKQEKTPKTPKGPS 242
K+PVK+ + +P K KS + K K + K + K++ K+P+ K P
Sbjct: 317 KSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPE 376
Query: 243 SVEDIKAKMQASIEKGGSLPKVEAK 267
+ + S EK S K EAK
Sbjct: 377 KAKSPVKEEAKSPEKAKSPVKEEAK 401
Score = 32.8 bits (73), Expect = 2.1
Identities = 22/79 (27%), Positives = 37/79 (45%), Gaps = 2/79 (2%)
Query: 189 KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIK 248
K+PVK+ + +P K + K + +P K + K++ K+P+ K P+ +
Sbjct: 177 KSPVKEEAK-SPEKAKSPVKEEAKSPAEAKSPE-KAKSPVKEEAKSPEKAKSPAEAKSPV 234
Query: 249 AKMQASIEKGGSLPKVEAK 267
+ S EK S K EAK
Sbjct: 235 KEEAKSPEKAKSPEKEEAK 253
Score = 32.8 bits (73), Expect = 2.1
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 189 KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIK 248
K K ++ A+ +D K ++ + +G+E K +EKT K P ED K
Sbjct: 458 KEAPKPAVEKPKESTAEAKKDEAEDKKKAAPAKMEGKEEAKPKEKTEVAKKEP---EDAK 514
Query: 249 AKMQAS-IEKGGSLPKVE 265
AK + EK PK E
Sbjct: 515 AKEPSKPTEKEPEKPKKE 532
Score = 32.1 bits (71), Expect = 3.6
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 14/93 (15%)
Query: 189 KAPVKKSIRD-----TPAKNAQKSNQNGKDSKPSSTPRS-----KGQESFKKQEKTPKTP 238
K+PVK+ + +P K KS K + + +P K + K++ K+P+
Sbjct: 93 KSPVKEEAKSPEKAKSPVKEEAKSPAEAKSPEKAKSPAEAKSPEKAKSPVKEEAKSPEKA 152
Query: 239 KGPS---SVEDIKAKMQA-SIEKGGSLPKVEAK 267
K P+ S E K+ +A S EK S K EAK
Sbjct: 153 KSPAEAKSPEKAKSPAEAKSPEKAKSPVKEEAK 185
O18642 chaetopterus variopedatus. histone h1. 11/1998
Length = 202
Score = 32.8 bits (73), Expect = 2.1
Identities = 26/77 (33%), Positives = 34/77 (43%), Gaps = 9/77 (11%)
Query: 193 KKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQ--EKTPKTPKGPSSVEDIKAK 250
KK + AK A K K KP TP+ K KK+ EK KTPK KA
Sbjct: 113 KKPAKKPAAKKATKPKAAAKPKKPK-TPKKKAAAKPKKEKKEKKAKTPK------KAKAA 165
Query: 251 MQASIEKGGSLPKVEAK 267
++ + +K + PK K
Sbjct: 166 VKKTPKKAAAKPKTVKK 182
O61214 caenorhabditis elegans. w03d8.3 protein.
11/1998
Length = 122
Score = 32.8 bits (73), Expect = 2.1
Identities = 16/45 (35%), Positives = 23/45 (50%)
Query: 191 PVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTP 235
PV + + + +K+ Q S N KD K T RS G +S + E P
Sbjct: 46 PVSPAQKGSKSKSNQSSGDNSKDKKKKRTKRSGGSKSKESSEPPP 90
Q23903 dictyostelium discoideum (slime mold).
5'-b-module (fragment). 11/1998
Length = 446
Score = 32.8 bits (73), Expect = 2.1
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 214 SKPSSTPRSKGQESFKKQEKTPKTPK-GPSSVEDIKAKMQASIEKGGSLPKVEAKFINYV 272
SK +TP++K Q+ + KTP PK G + IK KM I+ + K K I+
Sbjct: 351 SKLLNTPKNKQQDKTNRTNKTPVKPKLGEYGQKSIKTKMDEDID---NFNKEILKQISKS 407
Query: 273 KNCFRMTDQE 282
KN DQ+
Sbjct: 408 KNPTNTQDQQ 417
P07305 homo sapiens (human). histone h1' (h1.0)
(h1(0)). 7/1998
Length = 193
Score = 32.5 bits (72), Expect = 2.7
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 10/81 (12%)
Query: 189 KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESF---KKQEKTPKTPKG----- 240
K +KK A +K+ KP +TP K ++ K+ K PKT K
Sbjct: 110 KKEIKKVATPKKASKPKKAASKAPTKKPKATPVKKAKKKLAATPKKAKKPKTVKAKPVKA 169
Query: 241 --PSSVEDIKAKMQASIEKGG 259
P + +K K ++S ++ G
Sbjct: 170 SKPKKAKPVKPKAKSSAKRAG 190
Q05831 mytilus trossulus (blue mussel). sperm-specific
protein phi-2b (pl-ii*) (sperm-specific histone h1-like
protein) [contains: protein phi-3 (pl-iv)]. 10/1994
Length = 202
Score = 32.5 bits (72), Expect = 2.7
Identities = 20/77 (25%), Positives = 37/77 (47%), Gaps = 3/77 (3%)
Query: 190 APVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKA 249
+P K +P K + K+ N +K S ++ ++S K + K PK+PK ++ K
Sbjct: 123 SPKKAKKAKSPKKKSSKNKSNNAKAKKSPRKKAAVKKSTKSKAKKPKSPKKKAAK---KT 179
Query: 250 KMQASIEKGGSLPKVEA 266
++ +K PK +A
Sbjct: 180 ARKSPKKKARKSPKKKA 196
O42854 schizosaccharomyces pombe (fission yeast).
hypothetical 170.5 kd protein. 6/1998
Length = 1611
Score = 32.5 bits (72), Expect = 2.7
Identities = 19/58 (32%), Positives = 32/58 (54%), Gaps = 6/58 (10%)
Query: 190 APV--KKSIRDTPAKNAQKSNQNGKDSKP----SSTPRSKGQESFKKQEKTPKTPKGP 241
AP+ K ++R TPAK+++++ DS P SST ++S +Q +PK + P
Sbjct: 451 APIGRKNTLRRTPAKSSEEAKSTTNDSSPPKDSSSTSTQPTEQSNAQQAPSPKEEERP 508
P91122 caenorhabditis elegans. similarity human to
line-1 reverse transcriptase homolog. 11/1998
Length = 552
Score = 32.5 bits (72), Expect = 2.7
Identities = 26/93 (27%), Positives = 40/93 (42%), Gaps = 22/93 (23%)
Query: 197 RDTPAKNAQKSNQNGKDSKPSSTP-----------RSKGQESFKKQ------EKTPKTPK 239
+D +K+ +K +N K KPS+ P RSKG+ Q + PK K
Sbjct: 111 KDVKSKDEKKKKKNSKGKKPSTDPLFSGPLTQAPKRSKGETQELNQLLENNAQNKPKKVK 170
Query: 240 GPSSVEDIKAKMQASIEK-----GGSLPKVEAK 267
PS ++ I K + + + G S +V AK
Sbjct: 171 EPSGIDAIDLKSDSLVVEKTQLSGDSALRVTAK 203
Q41111 phaseolus vulgaris (kidney bean) (french bean).
dehydrin. 1/1999
Length = 202
Score = 32.5 bits (72), Expect = 2.7
Identities = 20/86 (23%), Positives = 41/86 (47%)
Query: 189 KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIK 248
K + + + + + ++ S + G+D + + + +E K +EK K +SV K
Sbjct: 63 KHSLLEKLHRSDSSSSSSSEEEGEDGEKKKKKKKEKKEKKKIEEKIEGYHKEDTSVPVEK 122
Query: 249 AKMQASIEKGGSLPKVEAKFINYVKN 274
++ S EK G L K++ K + K+
Sbjct: 123 VEVVESEEKKGFLEKIKEKLPGHKKS 148
P13475 dictyostelium discoideum (slime mold). 3f
protein precursor (fragment). 11/1995
Length = 215
Score = 32.1 bits (71), Expect = 3.6
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Query: 203 NAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKT-PKGPSSVEDIKAKMQASIEKGGSL 261
NA +N P++ KG +E +PKT K S D K + K GS
Sbjct: 123 NADAANTENAQKSPNTQSTQKGSPKSDAKEASPKTDAKEASPKSDAKEASPKTDTKQGSS 182
Query: 262 PKVEAK 267
PK + K
Sbjct: 183 PKTDTK 188
P43274 mus musculus (mouse). histone h1.4 (h1 var.2)
(h1e). 7/1998
Length = 218
Score = 32.1 bits (71), Expect = 3.6
Identities = 26/84 (30%), Positives = 40/84 (46%), Gaps = 7/84 (8%)
Query: 189 KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQE--KTPKTPKGPSSVED 246
K P K + T K+ +K+ + K KP++ +K +S KK + K K PK P+ +
Sbjct: 135 KKPKKAAGTATAKKSTKKTPKKAK--KPAAAAGAKKAKSPKKAKATKAKKAPKSPAKAKT 192
Query: 247 IK---AKMQASIEKGGSLPKVEAK 267
+K AK + S K K AK
Sbjct: 193 VKPKAAKPKTSKPKAAKPKKTAAK 216
Q23330 caenorhabditis elegans. coded for by c. elegans
cdna yk61e11.3. 11/1998
Length = 550
Score = 32.1 bits (71), Expect = 3.6
Identities = 20/66 (30%), Positives = 35/66 (52%), Gaps = 5/66 (7%)
Query: 202 KNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKGGSL 261
K+++KS++ K+ K ++TP +ES ++P+T + P S E + S E+
Sbjct: 301 KDSKKSHKKTKEEKVTTTPEPSTEES----SESPETSEEPQSSESTPTS-EESTEQSTEK 355
Query: 262 PKVEAK 267
PK E K
Sbjct: 356 PKKEDK 361
O45198 caenorhabditis elegans. w09g12.7 protein.
11/1998
Length = 368
Score = 32.1 bits (71), Expect = 3.6
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 202 KNAQKSNQNGK--DSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKM 251
K ++KS G DS SS S ++ KK++K+ K K P S E++ K+
Sbjct: 162 KKSKKSKNKGSSSDSSDSSDDSSDDEKPKKKKKKSKKPKKAPKSDEEVTIKI 213
Q62485 mus musculus (mouse). cochlear mrna (clone
29c9) (fragment). 11/1998
Length = 108
Score = 32.1 bits (71), Expect = 3.6
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 208 NQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAK 250
+QNG++ + P+ G+ES EK P+GP +V +++
Sbjct: 38 SQNGEEEEVEIQPQPDGEESISDAEKVVLAPQGPPTVRGSRSR 80
O55035 rattus norvegicus (rat). matrin cyclophilin (ec
5.2.1.8). 6/1998
Length = 752
Score = 32.1 bits (71), Expect = 3.6
Identities = 20/93 (21%), Positives = 45/93 (47%), Gaps = 12/93 (12%)
Query: 189 KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRS------------KGQESFKKQEKTPK 236
K+ S D+ + + +S+ + DS+ +S +S K ++ KK++K+ K
Sbjct: 192 KSSSSSSSSDSDSSSDSQSSSDSSDSETASEEKSRKRKKKHRKNSRKHKKEKKKRKKSKK 251
Query: 237 TPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFI 269
+P S +++ A+ Q+++ P E +F+
Sbjct: 252 SPSSESEADNVDAQPQSTVRPEEIPPIPENRFL 284
P91959 psammechinus miliaris (sand sea urchin).
cleavage stage histone h1. 11/1998
Length = 299
Score = 31.7 bits (70), Expect = 4.7
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 189 KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQES-FKKQEKTP 235
K+P KKS +PAK + K S P++T ++K +++ KK++KTP
Sbjct: 239 KSPAKKSKSKSPAKKPKSKAATTKTS-PAATGKAKAKKTVVKKKDKTP 285
Q21351 caenorhabditis elegans. k08f4.2 protein. 1/1999
Length = 537
Score = 31.7 bits (70), Expect = 4.7
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 193 KKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVED--IKAK 250
K+ + N S NGKDSK S T + K Q + P + P ED +K
Sbjct: 218 KEKTTSSTGHNGHASGANGKDSKSSKTEQPKEQ-----SKPAPPKQQTPKKAEDRIVKQD 272
Query: 251 MQASIEK 257
S+EK
Sbjct: 273 TPKSVEK 279
O49596 arabidopsis thaliana (mouse-ear cress). hmg
protein. 8/1998
Length = 144
Score = 31.7 bits (70), Expect = 4.7
Identities = 24/89 (26%), Positives = 34/89 (37%), Gaps = 7/89 (7%)
Query: 193 KKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKG-------QESFKKQEKTPKTPKGPSSVE 245
K S+ PAK A + KD P S +E+FKK+ K+
Sbjct: 14 KLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAA 73
Query: 246 DIKAKMQASIEKGGSLPKVEAKFINYVKN 274
K K + EK + K E + + Y KN
Sbjct: 74 GDKWKSLSDSEKAPYVAKAEKRKVEYEKN 102
Q91369 xenopus laevis (african clawed frog).
h1a=somatic h1 histone. 11/1998
Length = 229
Score = 31.7 bits (70), Expect = 4.7
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 189 KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIK 248
KAP+ + PA A+K+ ++ K K S +K + KK K K+P K
Sbjct: 129 KAPLAAAKAKKPAAAAKKTAKSPKKPKKVSAA-AKSPKKLKKPAKAAKSPAKKPKAAKPK 187
Query: 249 AKMQASIEKGGSLPKVEAK 267
++ +K PKV AK
Sbjct: 188 KATKSPAKKTAVKPKVAAK 206
Q09464 caenorhabditis elegans. hypothetical 28.5 kd
protein c16c10.8 in chromosome iii. 11/1997
Length = 253
Score = 31.3 bits (69), Expect = 6.1
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 254 SIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQ 289
S+ ++P+ EAKFIN++ N R+ D+ WQ
Sbjct: 98 SVAGFANIPRKEAKFINFLTNSCRLRDKNLALRAWQ 133
P27734 rattus norvegicus (rat). calcium channel
alpha-1 subunit. 11/1998
Length = 2143
Score = 31.3 bits (69), Expect = 6.1
Identities = 22/77 (28%), Positives = 34/77 (43%), Gaps = 11/77 (14%)
Query: 212 KDSKPSSTPRSKGQESFKKQEKTPKTPKG--PSSVEDIKAKMQASIEKGGSLPKVEAKFI 269
+D P S P + G+E E+ P+ P G P + ++ K EK +P+ A FI
Sbjct: 835 EDKSPHSNPNTAGEE----DEEEPEMPVGPRPRPLSELHLK-----EKAVPMPEASAFFI 885
Query: 270 NYVKNCFRMTDQEAIQD 286
N FR+ + D
Sbjct: 886 FSPNNRFRLQCHRIVND 902
P06350 oncorhynchus mykiss (rainbow trout) (salmo
gairdneri). histone h1. 12/1992
Length = 206
Score = 30.9 bits (68), Expect = 8.0
Identities = 21/79 (26%), Positives = 30/79 (37%)
Query: 189 KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIK 248
K P KK+ K A K K K + ++ + K+ K P TPK +
Sbjct: 106 KKPAKKAAAPKAKKVAAKKPAAAKKPKKVAAKKAVAAKKSPKKAKKPATPKKAAKSPKKV 165
Query: 249 AKMQASIEKGGSLPKVEAK 267
K A+ +K PK K
Sbjct: 166 KKPAAAAKKAAKSPKKATK 184
P11799 gallus gallus (chicken). myosin light chain
kinase, smooth muscle and non-muscle isozymes (ec
2.7.1.117) (mlck) [contains: telokin]. 7/1998
Length = 1906
Score = 30.9 bits (68), Expect = 8.0
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 22 ELKADKDYHFKVDNDE----NEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLA 77
+L+AD++Y F+V +E V +G ++EL EAE + EG +V
Sbjct: 1380 DLQADREYKFRVRAANVYGISEPSQESEVVKVGEKQEEELKEEEAELSDDEGKETEVNYR 1439
Query: 78 TLKMSVQPTVS 88
T+ ++ + VS
Sbjct: 1440 TVTINTEQKVS 1450
P87498 gallus gallus (chicken). vitellogenin i
precursor (minor vitellogenin) [contains: lipovitellin i
(lvi); phosvitin (pv); lipovitellin ii (lvii); ygp42].
12/1998
Length = 1912
Score = 30.9 bits (68), Expect = 8.0
Identities = 23/71 (32%), Positives = 35/71 (48%), Gaps = 10/71 (14%)
Query: 194 KSIRDTPAKNAQKSNQ-----NGKDSKPSSTPRSKGQESFKKQEKTPKTP-----KGPSS 243
KS R + + N++ S+ N K S SS+ S ++ KKQ KT P +G S
Sbjct: 1204 KSNRSSSSSNSKDSSSSSSKSNSKGSSSSSSKASGTRQKAKKQSKTTSFPHASAAEGERS 1263
Query: 244 VEDIKAKMQAS 254
V + K + Q+S
Sbjct: 1264 VHEQKQETQSS 1274
O14273 schizosaccharomyces pombe (fission yeast).
hypothetical 67.0 kd protein c8c9.04 in chromosome i.
11/1998
Length = 647
Score = 30.9 bits (68), Expect = 8.0
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 199 TPAKNAQKSNQNGKDSKPSSTPRSKGQESFK----KQEKTPKTPKGPSSVEDIKAKMQAS 254
TPAK+AQ S + SK +S P S G S K+ P+S + +++K A
Sbjct: 500 TPAKSAQSSKHARRPSKQASAPSSPGTTSAAVPGGKKSAIEAAAPIPTSADTVESKHAAG 559
Query: 255 IEKGGSLP 262
++P
Sbjct: 560 SGSATTIP 567
Q24565 drosophila melanogaster (fruit fly).
nucleoplasmin-like protein-short. 11/1998
Length = 121
Score = 30.9 bits (68), Expect = 8.0
Identities = 22/74 (29%), Positives = 38/74 (50%), Gaps = 4/74 (5%)
Query: 44 LRTVSLGAGAKD-ELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRL 102
++ + LGA AK+ E ++VE +N +++ +A LK V+ V +L
Sbjct: 3 IKQILLGAEAKENEFNVVE---VNTPKDSVQIPIAVLKAGETRAVNPDVEFYESKVTFKL 59
Query: 103 KCGSGPVHISGQHL 116
GSGPV+I G ++
Sbjct: 60 IKGSGPVYIHGHNI 73
O02155 caenorhabditis elegans. coded for by c. elegans
cdna yk77b5.5. 11/1998
Length = 327
Score = 30.9 bits (68), Expect = 8.0
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 193 KKSIRDTPAKNAQKSNQN---GKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKA 249
K S +PAK+A+K++++ + S TP +S + KTPK PS +
Sbjct: 27 KMSKSPSPAKSARKASKSPARARTSNVKKTPSRSASKSATRGRTASKTPKTPSKTPSSAS 86
Query: 250 KMQASIEKG 258
S +G
Sbjct: 87 ARSRSRSRG 95
Q40363 medicago sativa (alfalfa). num1 protein. 1/1999
Length = 635
Score = 30.9 bits (68), Expect = 8.0
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 190 APVKKSIRDTPAKNAQKSNQNGKDSKPS--STPRSKGQESFKKQEKTPKTPKGPSSVEDI 247
APVKK + + + S + +D KP+ + P G KK + + + S ED
Sbjct: 135 APVKKDDESSEEDSDESSESSDEDKKPAAKAVPSKNGSAPAKKDDSSEEEDSEDSD-EDE 193
Query: 248 KAKMQASIEKGGSL 261
K +A K GS+
Sbjct: 194 KPAAKAVSSKNGSV 207
P35663 homo sapiens (human). cylicin i (multiple-band
polypeptide i) (fragment). 12/1998
Length = 598
Score = 30.9 bits (68), Expect = 8.0
Identities = 23/77 (29%), Positives = 32/77 (40%), Gaps = 6/77 (7%)
Query: 189 KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVE--- 245
K KKS+++ S G DSK KG++ KK +K K S E
Sbjct: 377 KTDNKKSVKNDEESTDADSEPKG-DSKKGKKDEKKGKKDSKKDDKKKDAKKNAESTEMES 435
Query: 246 --DIKAKMQASIEKGGS 260
++K + S EK GS
Sbjct: 436 DLELKKDKKHSKEKKGS 452
O36424 alcelaphine herpesvirus 1 (wildebeest
herpesvirus). putative glycoprotein. 11/1998
Length = 472
Score = 30.9 bits (68), Expect = 8.0
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 200 PAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPK--GPSSVEDIKAKMQASIEK 257
P +++S +G +TPRSK +QE P P+ P+S E ++ +++ ++K
Sbjct: 366 PTPQSKESTSSGLSG---ATPRSKAPAGRGRQEPPPLPPRDYDPASPEALRLELRDIVQK 422
Query: 258 ----GGSLPKVEAKF 268
GG+ ++EA F
Sbjct: 423 VRYIGGAYNELEAIF 437