BLAST Alignments for npm_human.sw

Alignment of npm_human.sw to GB_PR1:HUMB23A
	M28699 Homo sapiens nucleolar phosphoprotein B23
           (NPM1) mRNA, complete cds. 12/1994
           Length = 1285
           
 Score =  486 bits (1238), Expect = e-136
 Identities = 247/294 (84%), Positives = 247/294 (84%)
 Frame = +1

Query: 1   MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 60
           MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV
Sbjct: 88  MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 267

Query: 61  EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLXXXX 120
           EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL    
Sbjct: 268 EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVE 447

Query: 121 XXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXXXX 180
                        KLLSISGKRSAPGGGSKVPQKKVKL                      
Sbjct: 448 EDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVKLAADEDDDDDDEEDDDEDDDDDD 627

Query: 181 XXXXXXXXKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKG 240
                   KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKG
Sbjct: 628 FDDEEAEEKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKG 807

Query: 241 PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 294
           PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL
Sbjct: 808 PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 969


Alignment of npm_human.sw to GB_PR1:HUMNUMB23
	M26697 Human nucleolar protein (B23) mRNA,
           complete cds. 10/1992
           Length = 1293
           
 Score =  486 bits (1238), Expect = e-136
 Identities = 247/294 (84%), Positives = 247/294 (84%)
 Frame = +1

Query: 1   MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 60
           MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV
Sbjct: 91  MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 270

Query: 61  EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLXXXX 120
           EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL    
Sbjct: 271 EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVE 450

Query: 121 XXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXXXX 180
                        KLLSISGKRSAPGGGSKVPQKKVKL                      
Sbjct: 451 EDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVKLAADEDDDDDDEEDDDEDDDDDD 630

Query: 181 XXXXXXXXKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKG 240
                   KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKG
Sbjct: 631 FDDEEAEEKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKG 810

Query: 241 PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 294
           PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL
Sbjct: 811 PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 972


Alignment of npm_human.sw to GB_PR1:HUMNPM
	M23613 Human nucleophosmin mRNA, complete cds.
           10/1992
           Length = 1296
           
 Score =  486 bits (1238), Expect = e-136
 Identities = 247/294 (84%), Positives = 247/294 (84%)
 Frame = +1

Query: 1   MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 60
           MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV
Sbjct: 94  MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 273

Query: 61  EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLXXXX 120
           EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL    
Sbjct: 274 EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVE 453

Query: 121 XXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXXXX 180
                        KLLSISGKRSAPGGGSKVPQKKVKL                      
Sbjct: 454 EDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVKLAADEDDDDDDEEDDDEDDDDDD 633

Query: 181 XXXXXXXXKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKG 240
                   KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKG
Sbjct: 634 FDDEEAEEKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKG 813

Query: 241 PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 294
           PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL
Sbjct: 814 PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 975


Alignment of npm_human.sw to GB_RO:MUSN038A
	M33212 Mouse nucleolar protein N038 mRNA, complete
           cds. 11/1992
           Length = 1260
           
 Score =  467 bits (1188), Expect = e-130
 Identities = 240/294 (81%), Positives = 243/294 (82%)
 Frame = +1

Query: 1   MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 60
           MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV
Sbjct: 79  MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 258

Query: 61  EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLXXXX 120
           EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL    
Sbjct: 259 EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVE 438

Query: 121 XXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXXXX 180
                        KLL +SGKRSAPGGG+KVPQKKVKL                      
Sbjct: 439 EDAESEDEDEEDVKLLGMSGKRSAPGGGNKVPQKKVKLDEDDEDDDEDDEDDEDDDDDDF 618

Query: 181 XXXXXXXXKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKG 240
                   K PVKKS+RDTPAKNAQKSNQNGKD KPS TPRSKGQESFKKQEKTPKTPKG
Sbjct: 619 DEEETEE-KVPVKKSVRDTPAKNAQKSNQNGKDLKPS-TPRSKGQESFKKQEKTPKTPKG 792

Query: 241 PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 294
           PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL
Sbjct: 793 PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 954


Alignment of npm_human.sw to GB_RO:RATB23NP
	J03969 Rat nucleolar protein B23 mRNA, complete cds.
           6/1993
           Length = 1232
           
 Score =  467 bits (1188), Expect = e-130
 Identities = 240/294 (81%), Positives = 243/294 (82%)
 Frame = +2

Query: 1   MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 60
           MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV
Sbjct: 47  MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 226

Query: 61  EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLXXXX 120
           EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL    
Sbjct: 227 EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVE 406

Query: 121 XXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXXXX 180
                        KLL +SGKRSAPGGG+KVPQKKVKL                      
Sbjct: 407 EDAESEDEDEEDVKLLGMSGKRSAPGGGNKVPQKKVKLDEDDDEDDEDDEDDEDDDDDDF 586

Query: 181 XXXXXXXXKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKG 240
                   K PVKKS+RDTPAKNAQKSNQNGKD KPS TPRSKGQESFKKQEKTPKTPKG
Sbjct: 587 DEEETEE-KVPVKKSVRDTPAKNAQKSNQNGKDLKPS-TPRSKGQESFKKQEKTPKTPKG 760

Query: 241 PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 294
           PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL
Sbjct: 761 PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 922


Alignment of npm_human.sw to GB_RO:RATB23B
	M25062 Rat nucleolar protein B23.1 mRNA, complete
           cds. 9/1989
           Length = 1232
           
 Score =  467 bits (1188), Expect = e-130
 Identities = 240/294 (81%), Positives = 243/294 (82%)
 Frame = +2

Query: 1   MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 60
           MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV
Sbjct: 47  MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 226

Query: 61  EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLXXXX 120
           EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL    
Sbjct: 227 EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVE 406

Query: 121 XXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXXXX 180
                        KLL +SGKRSAPGGG+KVPQKKVKL                      
Sbjct: 407 EDAESEDEDEEDVKLLGMSGKRSAPGGGNKVPQKKVKLDEDDDEDDEDDEDDEDDDDDDF 586

Query: 181 XXXXXXXXKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKG 240
                   K PVKKS+RDTPAKNAQKSNQNGKD KPS TPRSKGQESFKKQEKTPKTPKG
Sbjct: 587 DEEETEE-KVPVKKSVRDTPAKNAQKSNQNGKDLKPS-TPRSKGQESFKKQEKTPKTPKG 760

Query: 241 PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 294
           PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL
Sbjct: 761 PSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 922


Alignment of npm_human.sw to GB_PR2:HSHB23
	X16934 Human hB23 gene for B23 nucleophosmin. 7/1995
           Length = 1163
           
 Score =  457 bits (1164), Expect = e-127
 Identities = 233/280 (83%), Positives = 233/280 (83%)
 Frame = +3

Query: 15  QNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKV 74
           QNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKV
Sbjct: 3   QNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKV 182

Query: 75  TLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLXXXXXXXXXXXXXXXXXK 134
           TLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL                 K
Sbjct: 183 TLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVEEDAESEDEEEEDVK 362

Query: 135 LLSISGKRSAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAPVKK 194
           LLSISGKRSAPGGGSKVPQKKVKL                              KAPVKK
Sbjct: 363 LLSISGKRSAPGGGSKVPQKKVKLAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKK 542

Query: 195 SIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQAS 254
           SIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQAS
Sbjct: 543 SIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQAS 722

Query: 255 IEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 294
           IEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL
Sbjct: 723 IEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 842


Alignment of npm_human.sw to GB_HTG2:AC007068
	AC007068 Homo sapiens clone RPCI11-75L1, WORKING
            DRAFT SEQUENCE, 78 unordered pieces. 3/1999
            Length = 112084
            
 Score =  354 bits (900), Expect = e-114
 Identities = 193/254 (75%), Positives = 195/254 (75%)
 Frame = +2

Query: 41   QLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVL 100
            QLSLRTVS GAGAKDELHIVEAEAMN EGSPIKVTLATLKMSVQPTVSLGGFEITPPV L
Sbjct: 8501 QLSLRTVSSGAGAKDELHIVEAEAMNDEGSPIKVTLATLKMSVQPTVSLGGFEITPPVDL 8680

Query: 101  RLKCGSGPVHISGQHLXXXXXXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVKLXX 160
            RLKCGSGPVHISGQHL                 KLLSISGK+SAPGGG    QKKVKL  
Sbjct: 8681 RLKCGSGPVHISGQHLVAVKEGAESEDEEEEDVKLLSISGKQSAPGGG----QKKVKLAA 8848

Query: 161  XXXXXXXXXXXXXXXXXXXXXXXXXXXXKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTP 220
                                        KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTP
Sbjct: 8849 AADDDDDEDDDDDDDEEAEE--------KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTP 9004

Query: 221  RSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTD 280
            RSKGQESFKKQEK+PKTPKG SSVEDIKAKMQASIEK GSLPKVE KFINYVKN F MTD
Sbjct: 9005 RSKGQESFKKQEKSPKTPKGSSSVEDIKAKMQASIEKRGSLPKVETKFINYVKNFFWMTD 9184

Query: 281  QEAIQDLWQWRKSL 294
            QEAIQDLWQWRKSL
Sbjct: 9185 QEAIQDLWQWRKSL 9226


 Score = 82.3 bits (200), Expect = e-114
 Identities = 37/39 (94%), Positives = 37/39 (94%)
 Frame = +3

Query: 1    MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENE 39
            MEDSMDMDMSPLRPQNYLF CELKADKD HFKVDNDENE
Sbjct: 8382 MEDSMDMDMSPLRPQNYLFSCELKADKDDHFKVDNDENE 8498


Alignment of npm_human.sw to GB_PR3:AC004941
	AC004941 Homo sapiens PAC clone DJ0979P20 from
             7q33-q35, complete sequence. 3/1999
             Length = 122759
             
 Score =  391 bits (993), Expect = e-107
 Identities = 204/290 (70%), Positives = 219/290 (75%)
 Frame = +2

Query: 5     MDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEA 64
             +DM M PLRPQNYLF CELKA+KDYHFKVDN+ENEHQL L T++LGAGA DEL IVEAEA
Sbjct: 35630 VDMGMRPLRPQNYLFSCELKANKDYHFKVDNNENEHQLPLTTINLGAGAMDELDIVEAEA 35809

Query: 65    MNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLXXXXXXXX 124
             MNYEGSPIKV LATLKMSVQPTVSLGGFEITPPVVL+LKCGSGPVH SGQHL        
Sbjct: 35810 MNYEGSPIKVILATLKMSVQPTVSLGGFEITPPVVLQLKCGSGPVHTSGQHLVAVEEEAE 35989

Query: 125   XXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXXXXXXXX 184
                      KLLSISGK+SAPGGGSK+PQKKVKL                          
Sbjct: 35990 SEDEDKEVVKLLSISGKQSAPGGGSKLPQKKVKL------------AADEDDDGDDFDDK 36133

Query: 185   XXXXKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSV 244
                 K   +       AKNAQKSNQNGKDSKP ST RS GQESFKKQ+KTP+TP+GPSSV
Sbjct: 36134 ETEEKHQ*RNLYEILQAKNAQKSNQNGKDSKPPSTSRSNGQESFKKQQKTPETPEGPSSV 36313

Query: 245   EDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 294
             EDIKAKMQASIEKGGS+P VEAKFI+YVKNCF+MTDQEAIQDLWQ RKSL
Sbjct: 36314 EDIKAKMQASIEKGGSIPTVEAKFISYVKNCFQMTDQEAIQDLWQ*RKSL 36463


Alignment of npm_human.sw to GB_RO:RATB23A
	J04943 Rat nucleolar protein B23.2 mRNA, complete
           cds, clone JH2. 6/1990
           Length = 1164
           
 Score =  388 bits (986), Expect = e-106
 Identities = 203/257 (78%), Positives = 206/257 (79%)
 Frame = +1

Query: 1   MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 60
           MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV
Sbjct: 76  MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 255

Query: 61  EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLXXXX 120
           EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL    
Sbjct: 256 EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVE 435

Query: 121 XXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXXXX 180
                        KLL +SGKRSAPGGG+KVPQKKVKL                      
Sbjct: 436 EDAESEDEDEEDVKLLGMSGKRSAPGGGNKVPQKKVKLDEDDDEDDEDDEDDEDDDDDDF 615

Query: 181 XXXXXXXXKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKG 240
                   K PVKKS+RDTPAKNAQKSNQNGKD KPS TPRSKGQESFKKQEKTPKTPKG
Sbjct: 616 DEEETEE-KVPVKKSVRDTPAKNAQKSNQNGKDLKPS-TPRSKGQESFKKQEKTPKTPKG 789

Query: 241 PSSVEDIKAKMQASIEK 257
           PSSVEDIKAKMQASIEK
Sbjct: 790 PSSVEDIKAKMQASIEK 840


Alignment of npm_human.sw to GB_HTG1:AC006078
	AC006078 Homo sapiens Chromosome 11q12.2 PAC clone
              pDJ688p12 containing uteroglobin gene, WORKING DRAFT
              SEQUENCE, 11 unordered pieces. 12/1998
              Length = 151557
              
 Score =  237 bits (598), Expect = 6e-92
 Identities = 134/196 (68%), Positives = 137/196 (69%), Gaps = 1/196 (0%)
 Frame = -1

Query: 99     VLRLKCGSGPVHISGQHLXXXXXXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVKL 158
              VLRL CGSG  HISGQHL                 KLLS+SGKRSAPGGGSKVPQKKVKL
Sbjct: 138480 VLRLMCGSGLGHISGQHLVAVEEDARKDEEEEDV-KLLSVSGKRSAPGGGSKVPQKKVKL 138304

Query: 159    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-KAPVKKSIRDTPAKNAQKSNQNGKDSKPS 217
                                             KAPVK+SI DTPAKNAQKSNQNGKDSKPS
Sbjct: 138303 AADEDDDYEDDDDDEDDDDDDDDFDDKETKEKAPVKQSI*DTPAKNAQKSNQNGKDSKPS 138124

Query: 218    STPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFR 277
              STPRSK QESFKKQEKTPK PKGPSSVED+KA MQA IEKGGSLPKVEAKFINYVKNCFR
Sbjct: 138123 STPRSKRQESFKKQEKTPKIPKGPSSVEDVKANMQARIEKGGSLPKVEAKFINYVKNCFR 137944

Query: 278    MTDQEAIQDLWQWRKSL 294
              MT   AIQDL QWRKSL
Sbjct: 137943 MT---AIQDL*QWRKSL 137902


 Score =  124 bits (309), Expect = 6e-92
 Identities = 68/98 (69%), Positives = 70/98 (71%)
 Frame = -2

Query: 1      MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 60
              MEDSMDMDMSPLRPQNYLF CELK  +                 +     AGAKDE H V
Sbjct: 138773 MEDSMDMDMSPLRPQNYLFSCELKGQQR*SL*GG***R*APAIFKNGQFRAGAKDEWHTV 138594

Query: 61     EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPV 98
              EAEAMNYEGSPIKVTLATLKMSVQP VSLGGFEITPPV
Sbjct: 138593 EAEAMNYEGSPIKVTLATLKMSVQPMVSLGGFEITPPV 138480


Alignment of npm_human.sw to GB_PR2:HSU70984
	U70984 Human Xp22 cosmids U106G5 and U26C6, complete
             sequence. 2/1997
             Length = 68548
             
 Score =  298 bits (756), Expect = 1e-91
 Identities = 164/263 (62%), Positives = 178/263 (67%)
 Frame = -3

Query: 1     MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 60
             MEDSMDMDMSPLRPQN LFGCELKA+KD HFKVDNDENE          G   +    ++
Sbjct: 61388 MEDSMDMDMSPLRPQN*LFGCELKANKDDHFKVDNDENETSYL*ERSV*GLVQRMNCTLL 61209

Query: 61    EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLXXXX 120
             +      +   +K+TLATLKMSVQP +SLGGFEITPP +L+LKC SGPVHISGQHL    
Sbjct: 61208 KKRQ*ITKAVQLKLTLATLKMSVQPKLSLGGFEITPPALLQLKCDSGPVHISGQHLVAVE 61029

Query: 121   XXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXXXX 180
                          KLLSISGK+  PG GSK PQKKVKL                      
Sbjct: 61028 EDAESEDEEEENVKLLSISGKQLVPGSGSKFPQKKVKL-----------VADEDDDDDDD 60882

Query: 181   XXXXXXXXKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKG 240
                     KAPVKKSI+DT AKNA KSNQNGKDSKPSSTPR KGQESFKKQEKTPKTPKG
Sbjct: 60881 FDDEETEEKAPVKKSIQDTTAKNAHKSNQNGKDSKPSSTPR*KGQESFKKQEKTPKTPKG 60702

Query: 241   PSSVEDIKAKMQASIEKGGSLPK 263
             PSSVED+KAKMQASIEKGGSLPK
Sbjct: 60701 PSSVEDVKAKMQASIEKGGSLPK 60633


 Score = 62.5 bits (149), Expect = 1e-91
 Identities = 27/30 (90%), Positives = 29/30 (96%)
 Frame = -2

Query: 265   EAKFINYVKNCFRMTDQEAIQDLWQWRKSL 294
             EAKFI+YVKNCF +TDQEAIQDLWQWRKSL
Sbjct: 60630 EAKFISYVKNCFWVTDQEAIQDLWQWRKSL 60541


Alignment of npm_human.sw to GB_HTG1:AC004127
	AC004127 Homo sapiens Chromosome 11q12 pac pDJ741n15,
              WORKING DRAFT SEQUENCE, 7 unordered pieces. 2/1998
              Length = 170215
              
 Score =  332 bits (843), Expect = 7e-90
 Identities = 193/294 (65%), Positives = 198/294 (66%), Gaps = 1/294 (0%)
 Frame = -1

Query: 1      MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 60
              MEDSMDMDMSPLRPQNYLF CELK  +                 +     AGAKDE H V
Sbjct: 117646 MEDSMDMDMSPLRPQNYLFSCELKGQQR*SL*GG***R*APAIFKNGQFRAGAKDEWHTV 117467

Query: 61     EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLXXXX 120
              EAEAMNYEGSPIKVTLATLKMSVQP VS  G       VLRL CGSG  HISGQHL    
Sbjct: 117466 EAEAMNYEGSPIKVTLATLKMSVQPMVSPWGL*NNTTSVLRLMCGSGLGHISGQHLVAVE 117287

Query: 121    XXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXXXX 180
                           KLLS+SGKRSAPGGGSKVPQKKVKL                      
Sbjct: 117286 EDARKDEEEEDV-KLLSVSGKRSAPGGGSKVPQKKVKLAADEDDDYEDDDDDEDDDDDDD 117110

Query: 181    XXXXXXXX-KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPK 239
                       KAPVK+SI DTPAKNAQKSNQNGKDSKPSSTPRSK QESFKKQEKTPK PK
Sbjct: 117109 DFDDKETKEKAPVKQSI*DTPAKNAQKSNQNGKDSKPSSTPRSKRQESFKKQEKTPKIPK 116930

Query: 240    GPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 294
              GPSSVED+KA MQA IEKGGSLPKVEAKFINYVKNCFRMT   AIQDL QWRKSL
Sbjct: 116929 GPSSVEDVKANMQARIEKGGSLPKVEAKFINYVKNCFRMT---AIQDL*QWRKSL 116774


Alignment of npm_human.sw to GB_OV:GGNPNO38
	X17200 Chicken mRNA for nucleolar protein No38
           (B23). 9/1993
           Length = 1137
           
 Score =  330 bits (838), Expect = 3e-89
 Identities = 179/294 (60%), Positives = 210/294 (70%), Gaps = 4/294 (1%)
 Frame = +1

Query: 1   MEDS-MDMD-MSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELH 58
           MEDS MDM+ M PLRPQ +LFGCELKA+K+Y FKVD++ENEHQLSLRTV+LGAGAKDELH
Sbjct: 61  MEDSAMDMESMGPLRPQTFLFGCELKAEKEYQFKVDDEENEHQLSLRTVTLGAGAKDELH 240

Query: 59  IVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLXX 118
           +VEAEA++YEG+P KV LA+LKMSVQPTVSLGGFEITPP VLRLKCGSGPV++SGQHL  
Sbjct: 241 VVEAEALDYEGNPTKVVLASLKMSVQPTVSLGGFEITPPFVLRLKCGSGPVYVSGQHL-V 417

Query: 119 XXXXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXX 178
                          K+ + S KR A GGG+K PQKK KL                    
Sbjct: 418 ALEEEPESEDEEEDTKIGNASTKRPASGGGAKTPQKKPKL--SEDDEDDDEDEDDDEDDE 591

Query: 179 XXXXXXXXXXKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEK--TPK 236
                     K P+KK  R+   KN QK+ QNGKDSKP STP SK +    K++K  TPK
Sbjct: 592 DDLDDDEEEIKTPMKKPAREPAGKNMQKAKQNGKDSKP-STPASKTKTPDSKKDKSLTPK 768

Query: 237 TPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 294
           TPK P S+E+IKAKMQAS++KG SLPK+E KF NYVKNCFR  DQ+ IQ LWQWR++L
Sbjct: 769 TPKVPLSLEEIKAKMQASVDKGCSLPKLEPKFANYVKNCFRTEDQKVIQALWQWRQTL 942


Alignment of npm_human.sw to GB_HTG1:HS696P19
	AL035588 Human DNA sequence *** SEQUENCING IN PROGRESS
             *** from clone 696P19, WORKING DRAFT SEQUENCE. 3/1999
             Length = 118308
             
 Score =  164 bits (412), Expect = 7e-86
 Identities = 86/117 (73%), Positives = 90/117 (76%)
 Frame = +3

Query: 41    QLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVL 100
             QLSLRTVS GAGAKDELHIVEAEAMNY+GSPIKVTLATLKMS QP VSLGGFEITP V L
Sbjct: 13047 QLSLRTVS*GAGAKDELHIVEAEAMNYKGSPIKVTLATLKMSAQPMVSLGGFEITPLVAL 13226

Query: 101   RLKCGSGPVHISGQHLXXXXXXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVK 157
              LKCGSGPVH SGQHL                 KLLS SGK+SAPG GSK+PQK+ K
Sbjct: 13227 WLKCGSGPVHASGQHLVAVEEDAESEGEEEEDVKLLSTSGKQSAPGSGSKIPQKRSK 13397


 Score =  127 bits (315), Expect = 7e-86
 Identities = 62/69 (89%), Positives = 66/69 (94%)
 Frame = +1

Query: 189   KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIK 248
             +APVKKSI+DTPA+NAQKS+QNGK SKPSSTPRSKGQESFKKQEKTPKTPKGP SVEDIK
Sbjct: 13465 EAPVKKSIQDTPARNAQKSDQNGKVSKPSSTPRSKGQESFKKQEKTPKTPKGPRSVEDIK 13644

Query: 249   AKMQASIEK 257
              KMQASIEK
Sbjct: 13645 TKMQASIEK 13671


 Score = 71.4 bits (172), Expect = 7e-86
 Identities = 32/39 (82%), Positives = 34/39 (87%)
 Frame = +1

Query: 1     MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENE 39
             MED MDMDMSPLR QNYLF CELKA+KD HFK DNDE+E
Sbjct: 12928 MEDLMDMDMSPLRSQNYLFSCELKANKDDHFKADNDEDE 13044


Alignment of npm_human.sw to GB_PR1:HUMDYSTRO
	M81257 Human dystrophin gene, exon 44. 11/1994
             Length = 14871
             
 Score =  305 bits (774), Expect = 9e-82
 Identities = 176/288 (61%), Positives = 192/288 (66%)
 Frame = -1

Query: 7     MDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMN 66
             MDMSPLRPQNYLFGCELKADKD HFKVDN+E E QLSLRTVSLGAGAKD+LHIVEAEAM+
Sbjct: 13833 MDMSPLRPQNYLFGCELKADKDDHFKVDNNEIEQQLSLRTVSLGAGAKDKLHIVEAEAMS 13654

Query: 67    YEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLXXXXXXXXXX 126
             Y+GSPIKVTLA LKMSVQP VSL GFEITP VVLRLKCGSGPVH+SGQHL          
Sbjct: 13653 YKGSPIKVTLAALKMSVQPMVSLEGFEITPSVVLRLKCGSGPVHVSGQHLVAGEEDTESE 13474

Query: 127   XXXXXXXKLLSISGKRSAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186
                    KL+SISGKRSAPGGGSKVPQKKVKL                            
Sbjct: 13473 DEQEEDVKLISISGKRSAPGGGSKVPQKKVKL---------AADEDDDFDDDDDFDDEET 13321

Query: 187   XXKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVED 246
               KAPVKKSI DTPAKNAQKSN+NGKDSKP STPRSKGQESFK ++ +  T +       
Sbjct: 13320 EEKAPVKKSI*DTPAKNAQKSNRNGKDSKP-STPRSKGQESFKTRKNS*NTQR-T*FCRR 13147

Query: 247   IKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 294
               +K  +   K        ++     +        EAIQDLWQWRKSL
Sbjct: 13146 H*SKNASKYRKRWFSS*SGSQVHELCEELLPDD*PEAIQDLWQWRKSL 13003


Alignment of npm_human.sw to GB_OV:XLNO38
	X05496 Xenopus laevis mRNA for nucleolar protein NO38.
           9/1993
           Length = 1039
           
 Score =  300 bits (760), Expect = 4e-80
 Identities = 169/294 (57%), Positives = 197/294 (66%), Gaps = 8/294 (2%)
 Frame = +3

Query: 1   MEDSMDMD-MSPLRPQNYLFGCELKADK-DYHFKVDNDENEHQLSLRTVSLGAGAKDELH 58
           MEDSMDMD ++PLRPQN+LFGCELKADK +Y FKV++DENEHQLSLRTVSLGA AKDELH
Sbjct: 21  MEDSMDMDNIAPLRPQNFLFGCELKADKKEYSFKVEDDENEHQLSLRTVSLGASAKDELH 200

Query: 59  IVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLXX 118
           +VEAE +NYEG  IK+ LA+LK SVQPTVSLGGFEITPPV+LRLK GSGPV++SGQHL  
Sbjct: 201 VVEAEGINYEGKTIKIALASLKPSVQPTVSLGGFEITPPVILRLKSGSGPVYVSGQHLVA 380

Query: 119 XXXXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXX 178
                               + KR AP   SKVP+KK +L                    
Sbjct: 381 LEDLESSDDEDEEHEPSPK-NAKRIAPDSASKVPRKKTRL---EEEEEDSDEDDDDDEDD 548

Query: 179 XXXXXXXXXXKAPVKKSIRDTPAKNAQKSNQNGKDS------KPSSTPRSKGQESFKKQE 232
                     + PVKK+   T +K AQK N NGK S      K   TP  KG++  K Q 
Sbjct: 549 DDEDDDEEEEETPVKKT-DSTKSKAAQKLNHNGKASALSTTQKTPKTPEQKGKQDTKPQ- 722

Query: 233 KTPKTPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRK 292
            TPKTPK P S E+IKAKMQ  +EKG  LPKVE KF NYVKNCFR  +Q+ I+DLW+WR+
Sbjct: 723 -TPKTPKTPLSSEEIKAKMQTYLEKGNVLPKVEVKFANYVKNCFRTENQKVIEDLWKWRQ 899

Query: 293 SL 294
           SL
Sbjct: 900 SL 905


Alignment of npm_human.sw to GB_OV:XLNLPNO38
	X56039 X.laevis mRNA for nucleolar-localized
           protein NO38. 2/1992
           Length = 1389
           
 Score =  300 bits (759), Expect = 5e-80
 Identities = 169/294 (57%), Positives = 198/294 (66%), Gaps = 8/294 (2%)
 Frame = +1

Query: 1   MEDSMDMD-MSPLRPQNYLFGCELKAD-KDYHFKVDNDENEHQLSLRTVSLGAGAKDELH 58
           MEDSMDMD ++PLRPQN+LFGCELK D K+Y FKVD DENEHQLSLRTVSLGA AKDELH
Sbjct: 40  MEDSMDMDTIAPLRPQNFLFGCELKGDKKEYSFKVD-DENEHQLSLRTVSLGASAKDELH 216

Query: 59  IVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLXX 118
           +VEAE +NYEG  IK+ LA+LK SVQPTVSLGGFEITPPV+LRLK GSGPV++SGQHL  
Sbjct: 217 VVEAEGINYEGKTIKIALASLKPSVQPTVSLGGFEITPPVILRLKSGSGPVYVSGQHLVA 396

Query: 119 XXXXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXX 178
                               + KR+AP   SKVP KK +L                    
Sbjct: 397 LEDLESSDEDDDEQIPSPK-NAKRAAPNAASKVPLKKTRL------EEEADSDEEDNDDD 555

Query: 179 XXXXXXXXXXKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRS------KGQESFKKQE 232
                     + PVKK+   T +K AQK N NGK S+ S+TP++      KG++  K Q 
Sbjct: 556 VDDEVDEEEEETPVKKTDLSTKSKVAQKLNHNGKASELSATPKTPKTPEQKGKQDTKSQ- 732

Query: 233 KTPKTPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRK 292
            TPKTPK P S E++KAKMQ  +EKG  LPKVE KF NYVKNCFR   Q+ IQDLW+WR+
Sbjct: 733 -TPKTPKTPLSFEEMKAKMQTILEKGTVLPKVEVKFANYVKNCFRTDSQKVIQDLWKWRQ 909

Query: 293 SL 294
           SL
Sbjct: 910 SL 915


Alignment of npm_human.sw to GB_PR1:HUMNUCPHOD
	L15318 Homo sapiens (clone NG5-4) processed
            pseudogene of nucleophosmin/B23 sequence. 7/1993
            Length = 1189
            
 Score =  122 bits (302), Expect = 2e-79
 Identities = 61/76 (80%), Positives = 66/76 (86%)
 Frame = +1

Query: 202  KNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKGGSL 261
            KNAQKSNQN KD    +T ++KGQE FKKQEKTPKTPKGPSSVEDIKAKMQA++EKG S 
Sbjct: 937  KNAQKSNQNRKDKTIINT-KNKGQEFFKKQEKTPKTPKGPSSVEDIKAKMQANVEKGLSF 1113

Query: 262  PKVEAKFINYVKNCFR 277
            PKVEAKF NYVKNCFR
Sbjct: 1114 PKVEAKFFNYVKNCFR 1161


 Score =  114 bits (282), Expect = 2e-79
 Identities = 57/61 (93%), Positives = 57/61 (93%), Gaps = 2/61 (3%)
 Frame = +2

Query: 1   MEDSMDM--DMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELH 58
           MEDSM M  DMSPLRPQNYLFGCELKADKDYHFKVDNDEN HQL LRTVSLGAGAKDEL 
Sbjct: 365 MEDSMGMYVDMSPLRPQNYLFGCELKADKDYHFKVDNDENGHQLFLRTVSLGAGAKDELD 544

Query: 59  IVE 61
           IVE
Sbjct: 545 IVE 553


 Score =  105 bits (260), Expect = 2e-79
 Identities = 61/118 (51%), Positives = 65/118 (54%)
 Frame = +3

Query: 89  LGGFEITPPVVLRLKCGSGPVHISGQHLXXXXXXXXXXXXXXXXXKLLSISGKRSAPGGG 148
           LG  EITPPV+LRLKCGSGPVHISGQHL                 +LLSISGKRSA GGG
Sbjct: 633 LGDSEITPPVILRLKCGSGPVHISGQHLVAVEEDAESEDEEEEDVRLLSISGKRSATGGG 812

Query: 149 SKVPQKKVKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAPVKKSIRDTPAKNAQK 206
           SKVPQK+VKL                              KAPVKKSI+DTPAK   K
Sbjct: 813 SKVPQKQVKL------------AADEDDGDDDFDDEETEGKAPVKKSIQDTPAKKCTK 950


 Score = 58.2 bits (138), Expect = 3e-07
 Identities = 30/39 (76%), Positives = 31/39 (78%)
 Frame = +1

Query: 52  GAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLG 90
           G K  +     EAMNYEGSPIKVTLATLKMSVQPTVSLG
Sbjct: 523 GCKG*IGHCRREAMNYEGSPIKVTLATLKMSVQPTVSLG 639


Alignment of npm_human.sw to GB_PR1:HUMNUCPHOE
	L15319 Homo sapiens (clone NG6-4) processed
          pseudogene of nucleophosmin/B23, complete insertion
          site. 5/1995
          Length = 865
          
 Score =  160 bits (401), Expect = 6e-78
 Identities = 82/89 (92%), Positives = 84/89 (94%), Gaps = 5/89 (5%)
 Frame = +3

Query: 5  MDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEA 64
          MD+DMS LRPQNYLFGCELKADKD HFKVDNDENE QLSLRTVSLGAGAKDELHIVEAEA
Sbjct: 3  MDVDMSSLRPQNYLFGCELKADKDCHFKVDNDENERQLSLRTVSLGAGAKDELHIVEAEA 182

Query: 65 MNYEGSPIKVTLATL-----KMSVQPTVSLGGFE 93
          MNYEGSPIKVTLATL     KMSVQPTVSLG  +
Sbjct: 183MNYEGSPIKVTLATLKMSVQKMSVQPTVSLGALK 284


 Score =  154 bits (386), Expect = 6e-78
 Identities = 90/145 (62%), Positives = 93/145 (64%), Gaps = 1/145 (0%)
 Frame = +2

Query: 89  LGGFEITPPVVLRLKCGSGPVHISGQHLXXXXXXXXX-XXXXXXXXKLLSISGKRSAPGG 147
           LGGFE TPPVVLRLKCGSGPVHISGQHL                  KLLSISGKRSA GG
Sbjct: 269 LGGFETTPPVVLRLKCGSGPVHISGQHLVAVEEDAELPKAEEEEDVKLLSISGKRSALGG 448

Query: 148 GSKVPQKKVKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAPVKKSIRDTPAKNAQKS 207
            SK+PQKKVKL                              K PVK+SI+DTPAKNAQKS
Sbjct: 449 SSKLPQKKVKLAADEDDDDDEEDDDDEDDDDDFNEEAEE--KVPVKQSIQDTPAKNAQKS 622

Query: 208 NQNGKDSKPSSTPRSKGQESFKKQEK 233
           NQNGKDSKP STPRSKGQESFKKQEK
Sbjct: 623 NQNGKDSKP-STPRSKGQESFKKQEK 697


 Score =  115 bits (284), Expect = 3e-24
 Identities = 61/94 (64%), Positives = 67/94 (70%)
 Frame = +3

Query: 193 KKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQ 252
           K  IR    +N Q  +Q  K+               K ++KTPKTPKGPSSV+DIKAKMQ
Sbjct: 615 KSQIRMEKTQNHQHQDQKDKNLS-------------KNRKKTPKTPKGPSSVKDIKAKMQ 755

Query: 253 ASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQD 286
           ASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQD
Sbjct: 756 ASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQD 857


Alignment of npm_human.sw to GB_PR3:AC005192
	AC005192 Homo sapiens BAC clone RG163K11 from 7q31,
             complete sequence. 9/1998
             Length = 128600
             
 Score =  229 bits (578), Expect = 1e-73
 Identities = 120/157 (76%), Positives = 127/157 (80%)
 Frame = +1

Query: 1     MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 60
             MEDSM+MDMSPLRPQ YLF CE KADKD HFKV++DEN+HQLSLRTVSLGAGAKDELHIV
Sbjct: 59098 MEDSMNMDMSPLRPQTYLFNCEPKADKDDHFKVNDDENKHQLSLRTVSLGAGAKDELHIV 59277

Query: 61    EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLXXXX 120
             EAEAMNY+GSPIKVTLATLKMSVQ TVSLGGFEI  PVVL+ KCG GPVHISGQHL    
Sbjct: 59278 EAEAMNYKGSPIKVTLATLKMSVQATVSLGGFEIPLPVVLQSKCGLGPVHISGQHL-VAV 59454

Query: 121   XXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVK 157
                          KLL ISGK SAP GGS+VP KKVK
Sbjct: 59455 EEDAESEDEVGDVKLLGISGK*SAPAGGSRVPWKKVK 59565


 Score =  113 bits (281), Expect = 6e-24
 Identities = 57/86 (66%), Positives = 73/86 (84%), Gaps = 3/86 (3%)
 Frame = +2

Query: 209   QNGKDSKPSSTPRSKGQESFKKQE---KTPKTPKGPSSVEDIKAKMQASIEKGGSLPKVE 265
             Q+G  S+  S  ++K +++  KQ+   K+P+T KG S VE+IKAKMQASIE+GGSLPKVE
Sbjct: 60011 QSG*QSQTPSQKQNKTKQNKTKQKNRKKSPETQKGSSPVENIKAKMQASIEQGGSLPKVE 60190

Query: 266   AKFINYVKNCFRMTDQEAIQDLWQWRKSL 294
             AK I+YVKNCF++TDQEAIQDLWQWR+SL
Sbjct: 60191 AKLISYVKNCFQITDQEAIQDLWQWRESL 60277


 Score = 71.8 bits (173), Expect = 1e-73
 Identities = 42/86 (48%), Positives = 54/86 (61%), Gaps = 1/86 (1%)
 Frame = +2

Query: 189   KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIK 248
             K PVKKSI D PAK+AQK +QNGKD KP  TPRSKGQESFKKQEK+P       +   + 
Sbjct: 59627 KTPVKKSI*DIPAKSAQK*SQNGKDLKP-LTPRSKGQESFKKQEKSPSAVDHACNTSTLG 59803

Query: 249   AKMQASIEKGG-SLPKVEAKFINYVKN 274
              ++   +  G    P   +K ++ +KN
Sbjct: 59804 GRVGQIMRSGD*DHPG*HSKTLSLLKN 59884


Alignment of npm_human.sw to GB_HTG1:HS616B8
	AL023803 Human DNA sequence *** SEQUENCING IN PROGRESS
             *** from clone 616B8, WORKING DRAFT SEQUENCE. 12/1998
             Length = 160699
             
 Score =  258 bits (652), Expect = 2e-67
 Identities = 142/239 (59%), Positives = 157/239 (65%)
 Frame = -1

Query: 1     MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 60
             M+D MD DMSP+RPQNYLFGCELKA KD HFKVDNDE+EHQLSLRTVS GAGAKDELHIV
Sbjct: 79435 MKDVMDTDMSPVRPQNYLFGCELKAIKDDHFKVDNDEDEHQLSLRTVSSGAGAKDELHIV 79256

Query: 61    EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLXXXX 120
             EAEAMNYEGSPIKVTLATLKMSVQP +SL GFEI PPVVL+LKCGSGPVHISGQHL    
Sbjct: 79255 EAEAMNYEGSPIKVTLATLKMSVQPMISLRGFEIIPPVVLQLKCGSGPVHISGQHLVAVE 79076

Query: 121   XXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXXXX 180
                          K LSISG+ SAPGGGS VP+KKVKL                      
Sbjct: 79075 EDAESEDEEEEDVKFLSISGR*SAPGGGSNVPEKKVKL--------------AAAANDDD 78938

Query: 181   XXXXXXXXKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPK 239
                     KAPVKK+I+DTPAK   K     K    ++T   + +   K ++K  K  K
Sbjct: 78937 FDDEETEEKAPVKKAIQDTPAKKCTKVKSEWKRLNTTNTKIKRTRILQKTRKKFLKYQK 78761


 Score = 68.7 bits (165), Expect = 2e-10
 Identities = 40/53 (75%), Positives = 42/53 (78%)
 Frame = -2

Query: 202   KNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQAS 254
             KNAQKSNQNGKDS P  TPRSKGQESFKKQEK     K  SSVE+ KAKMQA+
Sbjct: 78873 KNAQKSNQNGKDSIPP-TPRSKGQESFKKQEKNS*NIK--SSVENTKAKMQAA 78724


Alignment of npm_human.sw to GB_PR1:HSU04946
	U04946 Human nucleophosmin-anaplastic lymphoma
           kinase fusion protein (NPM/ALK) mRNA, complete cds.
           1/1995
           Length = 2043
           
 Score =  240 bits (606), Expect = 5e-62
 Identities = 116/116 (100%), Positives = 116/116 (100%)
 Frame = +1

Query: 1   MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 60
           MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV
Sbjct: 1   MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 180

Query: 61  EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL 116
           EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL
Sbjct: 181 EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL 348


Alignment of npm_human.sw to GB_PR2:HSU41742
	U41742 Human nucleophosmin-retinoic acid receptor
           alpha fusion protein NPM-RAR long form mRNA, complete
           cds. 5/1996
           Length = 2073
           
 Score =  240 bits (606), Expect = 5e-62
 Identities = 116/116 (100%), Positives = 116/116 (100%)
 Frame = +3

Query: 1   MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 60
           MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV
Sbjct: 84  MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 263

Query: 61  EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL 116
           EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL
Sbjct: 264 EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL 431


Alignment of npm_human.sw to GB_PR2:HSU41743
	U41743 Human nucleophosmin-retinoic acid receptor
           alpha fusion protein NPM-RAR short form mRNA, complete
           cds. 5/1996
           Length = 1944
           
 Score =  240 bits (606), Expect = 5e-62
 Identities = 116/116 (100%), Positives = 116/116 (100%)
 Frame = +3

Query: 1   MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 60
           MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV
Sbjct: 84  MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 263

Query: 61  EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL 116
           EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL
Sbjct: 264 EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL 431


Alignment of npm_human.sw to GB_PR1:D45915
	D45915 Human mRNA for p80 protein, complete cds.
           2/1999
           Length = 2584
           
 Score =  240 bits (606), Expect = 5e-62
 Identities = 116/116 (100%), Positives = 116/116 (100%)
 Frame = +3

Query: 1   MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 60
           MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV
Sbjct: 90  MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 269

Query: 61  EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL 116
           EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL
Sbjct: 270 EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL 437


Alignment of npm_human.sw to GB_PR1:HUMNUCPHOF
	L15320 Homo sapiens (clone NG7-6) processed
           pseudogene of nucleophosmin/B23, complete repeat unit.
           7/1993
           Length = 1700
           
 Score =  160 bits (401), Expect = 2e-55
 Identities = 86/103 (83%), Positives = 87/103 (83%)
 Frame = +3

Query: 1   MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 60
           MEDSMDMDMSPLRPQNYLF CELKADKD            QLSLRTVS GAGAKDELHIV
Sbjct: 384 MEDSMDMDMSPLRPQNYLFSCELKADKDDQL*GG*MIK*DQLSLRTVSSGAGAKDELHIV 563

Query: 61  EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLK 103
           EAEA+N EGSPIKVTLATLKMSVQPTVSLGGFEITPPV LRLK
Sbjct: 564 EAEALNDEGSPIKVTLATLKMSVQPTVSLGGFEITPPVDLRLK 692


 Score = 79.6 bits (193), Expect = 2e-55
 Identities = 68/154 (44%), Positives = 79/154 (51%), Gaps = 20/154 (12%)
 Frame = +1

Query: 141 KRSAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAPVKKSIRDTP 200
           K  +PGGG    QKKVKL                              KAPVKKSIRDTP
Sbjct: 805 KAVSPGGG----QKKVKLAAAAAAADDDEDDDDDDDEEAEE-------KAPVKKSIRDTP 951

Query: 201 AKNAQKSNQNG-------------KDSKPSSTPRSKGQESFKKQEKT-PKTPKGPSSVED 246
           AKNAQKSNQNG             KDSKPSSTPRSKGQES +K  K   K  K     + 
Sbjct: 952 AKNAQKSNQNGKDQNSSKCQVNQMKDSKPSSTPRSKGQESLQKTGKNLLKHQKDLVL*KT 1131

Query: 247 IKAKMQASIEKGGSLPK------VEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 294
           +K K +   +     PK      +  +F+  + NC         +  WQWRKSL
Sbjct: 1132LKQKCKQV*KNVVLFPKWKPSSSIM*RFL--LDNC-----P*VFKIFWQWRKSL 1272


 Score = 78.8 bits (191), Expect = 2e-13
 Identities = 38/45 (84%), Positives = 41/45 (90%)
 Frame = +3

Query: 229  KKQEKTPKTPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVK 273
            K ++K+PKTPKG SSVEDIKAKMQASIEK GSLPKVE KFINYVK
Sbjct: 1077 KNRQKSPKTPKGSSSVEDIKAKMQASIEKRGSLPKVETKFINYVK 1211


 Score = 41.0 bits (94), Expect = 0.049
 Identities = 23/46 (50%), Positives = 24/46 (52%)
 Frame = +2

Query: 105 GSGPVHISGQHLXXXXXXXXXXXXXXXXXKLLSISGKRSAPGGGSK 150
           GSGPVHISGQHL                 KLLSISGK+S    G K
Sbjct: 698 GSGPVHISGQHLVAVKEGAESEDEEEEDVKLLSISGKQSPLEVGRK 835


Alignment of npm_human.sw to GB_STS:HUMUT1833
	L17895 Human STS UT1833, sequence tagged site.
           3/1994
           Length = 538
           
 Score =  142 bits (354), Expect = 3e-51
 Identities = 72/76 (94%), Positives = 72/76 (94%)
 Frame = -2

Query: 41  QLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVL 100
           QLSLRTVS GAGAKDELHIVEAEAMN EGSPIKVTLATLKMSVQPTVSLGGFE TPPV L
Sbjct: 507 QLSLRTVSSGAGAKDELHIVEAEAMNDEGSPIKVTLATLKMSVQPTVSLGGFEXTPPVDL 328

Query: 101 RLKCGSGPVHISGQHL 116
           RLKCGSGPVHISGQHL
Sbjct: 327 RLKCGSGPVHISGQHL 280


 Score = 83.9 bits (204), Expect = 3e-51
 Identities = 50/87 (57%), Positives = 52/87 (59%)
 Frame = -1

Query: 134 KLLSISGKRSAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAPVK 193
           +LLSISGK+SAPGGG    QKKVKL                              KAPVK
Sbjct: 229 ELLSISGKQSAPGGG----QKKVKLAAAAAAADDDEDDDDDDDEEAEE-------KAPVK 83

Query: 194 KSIRDTPAKNAQKSNQNGKDSKPSSTP 220
            SIRDTPAKNAQKSNQNGKDSKPSSTP
Sbjct: 82  XSIRDTPAKNAQKSNQNGKDSKPSSTP 2


Alignment of npm_human.sw to GB_PR1:HUMNUCPHOB
	L15316 Homo sapiens (clone NG3-3) processed
           pseudogene of nucleophosmin/B23, complete repeat unit.
           1/1994
           Length = 1576
           
 Score =  180 bits (453), Expect = 9e-51
 Identities = 100/158 (63%), Positives = 111/158 (69%)
 Frame = +3

Query: 1   MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 60
           MEDS+DMDMSPLRPQN LFGCELKADKD HFKVDNDE EHQLSLR VSLGAG KDE ++V
Sbjct: 210 MEDSVDMDMSPLRPQNCLFGCELKADKDDHFKVDNDEKEHQLSLRMVSLGAGVKDESYVV 389

Query: 61  EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLXXXX 120
           EAEA+N +   +K      K  +       GFEI PPV+LRLKCGSG VH +GQH     
Sbjct: 390 EAEAVN*KAVQLK*HWQL*K-CLYSNGFPWGFEIIPPVLLRLKCGSGRVHANGQHF-VPV 563

Query: 121 XXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVKL 158
                        KLLSISGK++APGGGS VPQKKVKL
Sbjct: 564 EEDAESEDEDKDMKLLSISGKQAAPGGGSMVPQKKVKL 677


 Score =  149 bits (372), Expect = 1e-34
 Identities = 70/83 (84%), Positives = 76/83 (91%)
 Frame = +1

Query: 212 KDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINY 271
           KDS+P STPRSKGQESFKKQEKT KTPKGPSSVED++A+MQA+IEKG S P+ EAKFINY
Sbjct: 853 KDSEPPSTPRSKGQESFKKQEKTAKTPKGPSSVEDVRAEMQANIEKGDSFPREEAKFINY 1032

Query: 272 VKNCFRMTDQEAIQDLWQWRKSL 294
           VKNCF MTDQEAI DLWQWRKSL
Sbjct: 1033VKNCFWMTDQEAIPDLWQWRKSL 1101


 Score = 43.8 bits (101), Expect = 9e-51
 Identities = 24/51 (47%), Positives = 28/51 (54%)
 Frame = +2

Query: 189 KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPK 239
           K PVKK I DTPAKNA KSNQN K          KG+   + ++K  K  K
Sbjct: 785 KVPVKKYI*DTPAKNAHKSNQNEKTQSHHQHQDQKGKNPSRNRKKLLKHRK 937


Alignment of npm_human.sw to GB_OM:MRU59897
	U59897 Macropus robustus hypoxanthine
           phosphoribosyltransferase (Hprt) gene, intron 3. 1/1997
           Length = 1228
           
 Score =  200 bits (504), Expect = 4e-50
 Identities = 101/156 (64%), Positives = 120/156 (76%)
 Frame = +2

Query: 3   DSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEA 62
           ++ DMD++ +R Q++LFGCELKADKD+HFKV N++ EHQLSLRTVSLGA AKDELH+VEA
Sbjct: 386 ENTDMDVNHIRAQSFLFGCELKADKDFHFKVVNEQTEHQLSLRTVSLGASAKDELHVVEA 565

Query: 63  EAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLXXXXXX 122
           EA+N+EGSP  VTLA+LK+SVQPTVSLGGFEITPPVVLRLKCGSGPV+ISGQHL      
Sbjct: 566 EALNFEGSPTTVTLASLKLSVQPTVSLGGFEITPPVVLRLKCGSGPVYISGQHLVALEED 745

Query: 123 XXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVKL 158
                        L +  KR+A     K+P KKVKL
Sbjct: 746 VEENNVKLVN---LPLPAKRAASEIDDKIPSKKVKL 844


Alignment of npm_human.sw to GB_PR3:AC005569
	AC005569 Homo sapiens chromosome 16, cosmid clone 317H7
             (LANL), complete sequence. 9/1998
             Length = 34719
             
 Score =  178 bits (446), Expect = 6e-50
 Identities = 100/158 (63%), Positives = 110/158 (69%)
 Frame = -2

Query: 1     MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 60
             MEDS+DMDMSPLRPQN LFGCELKADKD HFKVDNDE E QLSLR VSLGAG KDE +IV
Sbjct: 29840 MEDSVDMDMSPLRPQNCLFGCELKADKDDHFKVDNDEKERQLSLRMVSLGAGVKDESYIV 29661

Query: 61    EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLXXXX 120
             EAEA+N +   +K      K  +       GFEI PPV+LRLKCGSG VH +GQH     
Sbjct: 29660 EAEAVN*KAVQLK*HWQL*K-CLYSNGFPWGFEIIPPVLLRLKCGSGRVHANGQHF-VPV 29487

Query: 121   XXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVKL 158
                          KLLSISGK++APGGGS VPQKKVKL
Sbjct: 29486 EEDAESEDEDKDMKLLSISGKQAAPGGGSMVPQKKVKL 29373


 Score =  151 bits (377), Expect = 3e-35
 Identities = 71/83 (85%), Positives = 77/83 (92%)
 Frame = -3

Query: 212   KDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINY 271
             KDS+PSSTPRSKGQESFKKQEKT KTPKGPSSVED++A+MQA+IEKG S P+ EAKFINY
Sbjct: 29197 KDSEPSSTPRSKGQESFKKQEKTAKTPKGPSSVEDVRAEMQANIEKGDSFPREEAKFINY 29018

Query: 272   VKNCFRMTDQEAIQDLWQWRKSL 294
             VKNCF MTDQEAI DLWQWRKSL
Sbjct: 29017 VKNCFWMTDQEAIPDLWQWRKSL 28949


 Score = 43.8 bits (101), Expect = 6e-50
 Identities = 24/51 (47%), Positives = 28/51 (54%)
 Frame = -1

Query: 189   KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPK 239
             K PVKK I DTPAKNA KSNQN K          KG+   + ++K  K  K
Sbjct: 29265 KVPVKKYI*DTPAKNAHKSNQNEKTQNHHQHQDQKGKNPSRNRKKLLKHRK 29113


Alignment of npm_human.sw to GB_PR1:HUMPPB23O
	M31004 Human nuclear phosphoprotein B23 mRNA,
           clone hpB2. 3/1990
           Length = 360
           
 Score =  169 bits (423), Expect = 1e-40
 Identities = 81/81 (100%), Positives = 81/81 (100%)
 Frame = +1

Query: 214 SKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVK 273
           SKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVK
Sbjct: 4   SKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVK 183

Query: 274 NCFRMTDQEAIQDLWQWRKSL 294
           NCFRMTDQEAIQDLWQWRKSL
Sbjct: 184 NCFRMTDQEAIQDLWQWRKSL 246


Alignment of npm_human.sw to GB_PR1:HUMPPB23N
	J02590 Human nucleolar phosphoprotein B23 mRNA,
           clone hpB1. 6/1989
           Length = 360
           
 Score =  159 bits (397), Expect = 1e-37
 Identities = 77/81 (95%), Positives = 78/81 (96%)
 Frame = +1

Query: 214 SKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVK 273
           SK SS+  SKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVK
Sbjct: 4   SKSSSSSSSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVK 183

Query: 274 NCFRMTDQEAIQDLWQWRKSL 294
           NCFRMTDQEAIQDLWQWRKSL
Sbjct: 184 NCFRMTDQEAIQDLWQWRKSL 246


Alignment of npm_human.sw to GB_OV:CHKNP1
	J03164 Chicken nucleolar protein B23/No38 mRNA, 5'
           end. 4/1994
           Length = 300
           
 Score =  158 bits (395), Expect = 2e-37
 Identities = 78/95 (82%), Positives = 90/95 (94%), Gaps = 2/95 (2%)
 Frame = +1

Query: 1   MEDS-MDMD-MSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELH 58
           MEDS MDM+ M PLRPQ +LFGCELKA+K+Y FKVD++ENEHQLSLRTV+LGAGAKDELH
Sbjct: 10  MEDSAMDMESMGPLRPQTFLFGCELKAEKEYQFKVDDEENEHQLSLRTVTLGAGAKDELH 189

Query: 59  IVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEIT 95
           +VEAEA++YEG+P KV LA+LKMSVQPTVSLGGFEIT
Sbjct: 190 VVEAEALDYEGNPTKVVLASLKMSVQPTVSLGGFEIT 300


Alignment of npm_human.sw to GB_PR1:HS244F1
	AL021330 Human DNA sequence from PAC 244F1 on chromosome
             6q16.1-16.3. Contains nucleophosmin (nucleolar
             phosphoprotein, B23, NPM1, numatrin) like pseudogene, ESTs
             and an STS with a CAG
             Length = 84621
             
 Score = 95.6 bits (234), Expect = 5e-37
 Identities = 58/99 (58%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
 Frame = +3

Query: 189   KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESF-KKQEKTPKTPKGPSSVEDI 247
             K PVKKS+  TPAKNAQKSNQN KD K S  PRSKG+ESF KK+ K     K   S    
Sbjct: 45780 KTPVKKSM*GTPAKNAQKSNQNEKDIK-SLKPRSKGKESFQKKRGKYSYNTKKT*SYRRP 45956

Query: 248   KAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDL 287
              +K  ++  K  SLPK++  FIN +KNCF MTDQEAIQDL
Sbjct: 45957 *SKNVSNNRKSSSLPKMKTIFINCIKNCFCMTDQEAIQDL 46076


 Score = 83.1 bits (202), Expect = 5e-37
 Identities = 52/113 (46%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
 Frame = +2

Query: 45    RTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSV-QPTVSLGGFEITPPVVLRLK 103
             R VSLG G ++E +++E   MNYEGS IK TLA LK +V         F I   +VL L+
Sbjct: 45380 RMVSLGTGTRNEFNVIETGIMNYEGSSIKATLAMLKKNVCTANCFPERF*IVLSMVLELQ 45559

Query: 104   CGSGPVHISGQHLXXXXXXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVK 157
             C S  VHIS QH                  KL SIS K SAPG GSK PQ+KV+
Sbjct: 45560 CSSDLVHISRQHF*AVEEDAESEDEEEADVKL*SISEK*SAPGSGSKFPQRKVQ 45721


 Score = 53.5 bits (126), Expect = 9e-06
 Identities = 29/52 (55%), Positives = 33/52 (62%)
 Frame = +1

Query: 1     MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAG 52
             MEDSMDM M P  P+        +   DYHF ++NDENEHQLSLR VSL  G
Sbjct: 44881 MEDSMDMYMIP*APRTVFLVVN*RLT-DYHFNMNNDENEHQLSLRMVSLHLG 45033


Alignment of npm_human.sw to GB_PR3:AC004994
	AC004994 Homo sapiens PAC clone DJ1194E15 from
            7p15.3-p21, complete sequence. 11/1998
            Length = 80331
            
 Score =  124 bits (308), Expect = 2e-36
 Identities = 81/157 (51%), Positives = 90/157 (56%), Gaps = 11/157 (7%)
 Frame = +1

Query: 1    MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 60
            +ED MD+DMSPLRPQN LF CELK             N   L    + +      E  + 
Sbjct: 4483 IEDLMDVDMSPLRPQN*LFNCELKLT-----------NIITLMWMMMKMSTSFL*EWPVQ 4629

Query: 61   EAEAM-----------NYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPV 109
            E   M           N     IKVTLATLKMSVQPTVS  GFEI PP+VL LK  SGPV
Sbjct: 4630 ELVPMMNCTSLKQKQ*NINAVQIKVTLATLKMSVQPTVSFVGFEIPPPMVLWLKHSSGPV 4809

Query: 110  HISGQHLXXXXXXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVK 157
            HI+GQHL                 KLLSISGKR+A  GGS+VPQKK K
Sbjct: 4810 HINGQHLTAVEEDAQ*EDEEEEDAKLLSISGKRAASRGGSEVPQKKSK 4953


 Score =  122 bits (304), Expect = 1e-26
 Identities = 63/87 (72%), Positives = 68/87 (77%), Gaps = 1/87 (1%)
 Frame = +3

Query: 206  KSNQNGKDSKPSSTPRSKGQESFKKQEKTP-KTPKGPSSVEDIKAKMQASIEKGGSLPKV 264
            K  QN +   P      KGQESFKKQ+K P KT KGPSSVE+IKAKMQAS +KGGSLPK+
Sbjct: 5091 KKTQNHQHQDP------KGQESFKKQKKNPPKTLKGPSSVENIKAKMQASTQKGGSLPKL 5252

Query: 265  EAKFINYVKNCFRMTDQEAIQDLWQWRK 292
            E  FINYVKNCF MTDQEAIQDLWQW K
Sbjct: 5253 ETNFINYVKNCFLMTDQEAIQDLWQWSK 5336


 Score = 52.3 bits (123), Expect = 2e-36
 Identities = 30/47 (63%), Positives = 32/47 (67%)
 Frame = +2

Query: 189  KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTP 235
            K+ VKKSI DTPAK AQKSNQ  KDSKP ST R K     +K EK P
Sbjct: 5024 KSSVKKSI*DTPAKIAQKSNQTEKDSKP-STSRPKRSRILQKTEKKP 5161


Alignment of npm_human.sw to GB_PR2:AC004538
	AC004538 Homo sapiens PAC clone DJ0887P04 from
             7p21-p22, complete sequence. 4/1998
             Length = 83079
             
 Score =  117 bits (291), Expect = 2e-35
 Identities = 75/150 (50%), Positives = 83/150 (55%)
 Frame = -2

Query: 8     DMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNY 67
             DM+PL+PQNYLFG EL  DK  HF V+NDE    +   +   G       H         
Sbjct: 44516 DMNPLKPQNYLFGYELNTDKVSHFNVNNDEKTTVIFKNSHFRG*YIG*IAHC*SRGNELQ 44337

Query: 68    EGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLXXXXXXXXXXX 127
               S    T  TLKMS+QP VSL GFEI PPVVL LK GSGP HISGQHL           
Sbjct: 44336 RWSD*NNT-GTLKMSIQPVVSLRGFEIPPPVVLWLKRGSGPGHISGQHLVAVEEEAE*ED 44160

Query: 128   XXXXXXKLLSISGKRSAPGGGSKVPQKKVK 157
                   KLLSI GK+SAP  GS+VPQKK K
Sbjct: 44159 EEEENMKLLSIPGKQSAPRNGSEVPQKKRK 44070


 Score = 97.9 bits (240), Expect = 4e-19
 Identities = 51/74 (68%), Positives = 60/74 (80%), Gaps = 1/74 (1%)
 Frame = -2

Query: 221   RSKGQESFKKQEKTPKTPKGPSSVE-DIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMT 279
             RS+  +  KK +K  KTPKGP SVE DI+AKMQA++EK  SLPKVEAKFIN+VK+CF MT
Sbjct: 43889 RSRITQKKKKGKKKTKTPKGPCSVEEDIRAKMQATVEKETSLPKVEAKFINHVKDCFWMT 43710

Query: 280   DQEAIQDLWQWRKSL 294
             DQEA+Q LWQ  KSL
Sbjct: 43709 DQEAVQGLWQ*MKSL 43665


 Score = 55.8 bits (132), Expect = 2e-35
 Identities = 31/49 (63%), Positives = 36/49 (73%)
 Frame = -3

Query: 191   PVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPK 239
             PVKKSI DT AKNAQ SNQ  +DS PS+ P S+GQES KK++K  K  K
Sbjct: 43984 PVKKSI*DTSAKNAQTSNQKEEDSTPSA-PTSEGQESLKKKKKGKKKLK 43841


Alignment of npm_human.sw to GB_PR2:HSNG26
	X54171 H.sapiens NG2-6 DNA. 5/1992
            Length = 6221
            
 Score = 87.4 bits (213), Expect = 5e-16
 Identities = 43/55 (78%), Positives = 46/55 (83%)
 Frame = +1

Query: 24   KADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLAT 78
            K  +  HFKVDNDENEHQLSLR VS GAGAK ELHIVE EAMN+EG+PIKVT AT
Sbjct: 4489 KGRRSDHFKVDNDENEHQLSLRMVSFGAGAKVELHIVEPEAMNFEGNPIKVTPAT 4653


 Score = 81.5 bits (198), Expect = 3e-26
 Identities = 45/64 (70%), Positives = 47/64 (73%)
 Frame = +2

Query: 189  KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIK 248
            K PV K I DT A+N Q SNQNGKDSKPS TPR K QESFKKQEK     K PSSV+DIK
Sbjct: 5147 KVPVNKCI*DTSAENTQNSNQNGKDSKPS-TPR*KRQESFKKQEKNS*NTKRPSSVKDIK 5323

Query: 249  AKMQ 252
            AK Q
Sbjct: 5324 AKTQ 5335


 Score = 80.4 bits (195), Expect = 6e-17
 Identities = 60/144 (41%), Positives = 78/144 (53%), Gaps = 29/144 (20%)
 Frame = +2

Query: 1    MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIV 60
            M +SMDMD+SPLRPQ+YLF CELKAD+    +    +            G   +    ++
Sbjct: 4421 MGNSMDMDISPLRPQDYLFSCELKADEVITLRWIMMKMSTSCL*EWSVSGLVQRLNCTLL 4600

Query: 61   EAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEIT------------------------- 95
                   +  P+K     L++ +QPT S G FEIT                         
Sbjct: 4601 NLRQ*ISKAIPLK*H-RQLEVYIQPTASPGSFEITPLHGLTVEVWTLK*HPSMVLLLKYG 4777

Query: 96   ----PPVVLRLKCGSGPVHISGQHLXXXXXXXXXXXXXXXXXKLLSISGKRSA 144
                P +V +LKCGSGPV+ISGQHL                 KLLSISGK+SA
Sbjct: 4778 L*NNPAMVFQLKCGSGPVYISGQHLVSVEEDAESEDEEEEDVKLLSISGKQSA 4936


 Score = 60.9 bits (145), Expect = 3e-26
 Identities = 29/36 (80%), Positives = 29/36 (80%)
 Frame = +1

Query: 253  ASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLW 288
            A  EK GSL KVEAKFINYVKNCFR TD  AIQDLW
Sbjct: 5332 AGTEKRGSLSKVEAKFINYVKNCFRKTDLVAIQDLW 5439


 Score = 30.5 bits (67), Expect = 6e-17
 Identities = 12/17 (70%), Positives = 14/17 (81%)
 Frame = +1

Query: 141  KRSAPGGGSKVPQKKVK 157
            K   PGGGSK+PQK+VK
Sbjct: 4924 KAICPGGGSKIPQKRVK 4974


Alignment of npm_human.sw to GB_OV:XLNOVA
	Z85983 X.laevis mRNA for NOVA protein. 9/1997
           Length = 1593
           
 Score =  106 bits (262), Expect = 1e-21
 Identities = 55/101 (54%), Positives = 72/101 (70%), Gaps = 2/101 (1%)
 Frame = +1

Query: 15  QNYLFGCELKAD-KDYHFKV-DNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPI 72
           ++YLFGCEL +  K Y F+V + D+  H + L+T+SLGAGAKDE ++VE  A NY+   +
Sbjct: 118 ESYLFGCELSSKTKQYTFEVNEEDDAVHLVCLQTISLGAGAKDEHNVVEVTAPNYQNKEV 297

Query: 73  KVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQH 115
            V LA LK+S QP V++G FEI  PV  RL  GSGPV ISG+H
Sbjct: 298 TVPLANLKLSCQPMVNVGYFEIEAPVTFRLTSGSGPVFISGRH 426


Alignment of npm_human.sw to GB_OV:XLNUPLR2
	X04766 Xenopus laevis mRNA for nucleoplasmin. 9/1993
           Length = 800
           
 Score =  105 bits (260), Expect = 2e-21
 Identities = 56/104 (53%), Positives = 75/104 (71%), Gaps = 3/104 (2%)
 Frame = +3

Query: 13  RPQNYLFGCEL-KADKDYHFKVDNDEN--EHQLSLRTVSLGAGAKDELHIVEAEAMNYEG 69
           +P + ++GCEL + DK + FKV++DE   EHQL+LRTV LG  AKDE +IVE      EG
Sbjct: 150 KPVSLIWGCELNEQDKTFEFKVEDDEEKCEHQLALRTVCLGDKAKDEFNIVEIVTQE-EG 326

Query: 70  SPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL 116
           +   V +ATLK S+ P  ++ G E+TPPV  RLK GSGP++ISGQH+
Sbjct: 327 AEKSVPIATLKPSILPMATMVGIELTPPVTFRLKAGSGPLYISGQHV 467


Alignment of npm_human.sw to GB_PR1:HUMNUCPHOA
	L15315 Homo sapiens (clone NG1-6) processed
           pseudogene of nucleophosmin/B23, complete repeat unit.
           7/1993
           Length = 1599
           
 Score =  104 bits (258), Expect = 3e-21
 Identities = 52/58 (89%), Positives = 53/58 (90%)
 Frame = +3

Query: 237 TPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 294
           TPKGPSSVEDIKAKMQASIEKGGSLPK EAK INYVKN F MT+QEAIQDLWQ RKSL
Sbjct: 384 TPKGPSSVEDIKAKMQASIEKGGSLPKTEAKLINYVKNSFWMTEQEAIQDLWQ*RKSL 557


 Score = 58.2 bits (138), Expect = 3e-07
 Identities = 32/43 (74%), Positives = 35/43 (80%), Gaps = 1/43 (2%)
 Frame = -3

Query: 32  KVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNY-EGSPIKV 74
           KV+ DEN H+L L  VSL AG KDELH+VEAEAMNY E SPIKV
Sbjct: 382 KVNTDENGHKLFL*MVSLKAGPKDELHMVEAEAMNYEEHSPIKV 251


Alignment of npm_human.sw to GB_OV:XLNUPLR
	Y00204 Xenopus laevis mRNA fragment for
           nucleoplasmin. 2/1999
           Length = 646
           
 Score =  102 bits (252), Expect = 1e-20
 Identities = 54/104 (51%), Positives = 74/104 (70%), Gaps = 3/104 (2%)
 Frame = +3

Query: 13  RPQNYLFGCEL-KADKDYHFKVDNDEN--EHQLSLRTVSLGAGAKDELHIVEAEAMNYEG 69
           +P + ++GCEL + +K + FK++++E   EHQL+LRTV LG  AKDE HIVE      EG
Sbjct: 21  KPVSLIWGCELNEQNKTFAFKIEDEEEKCEHQLALRTVCLGDKAKDEFHIVEIVTQE-EG 197

Query: 70  SPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL 116
               V +A+LK S+ P  ++ G E+TPPV  RLK GSGPV+ISGQH+
Sbjct: 198 KEKPVPIASLKPSILPMATMVGIELTPPVTFRLKAGSGPVYISGQHV 338


Alignment of npm_human.sw to GB_PR3:AF081280
	AF081280 Homo sapiens nucleoplasmin-3 (NPM3) mRNA,
           complete cds. 8/1998
           Length = 884
           
 Score = 96.3 bits (236), Expect = 1e-18
 Identities = 49/106 (46%), Positives = 70/106 (65%), Gaps = 2/106 (1%)
 Frame = +3

Query: 10  SPLRPQNYLFGCELKAD-KDYHFKVDN-DENEHQLSLRTVSLGAGAKDELHIVEAEAMNY 67
           +P+   ++ FGCEL    + + FKV+  D+ EH L+L  + L  GAKDE ++VE  A N+
Sbjct: 99  APVTMDSFFFGCELSGHTRSFTFKVEEEDDAEHVLALTMLCLTEGAKDECNVVEVVARNH 278

Query: 68  EGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQH 115
           +   I V +A LK+S QP +SL  F++ PPV  RLK GSGPV I+G+H
Sbjct: 279 DHQEIAVPVANLKLSCQPMLSLDDFQLQPPVTFRLKSGSGPVRITGRH 422


Alignment of npm_human.sw to GB_RO:MMU67172
	U67172 Mus musculus
           nucleophosmin/nucleoplasmin-related protein (Npm3-ps1)
           pseudogene, complete cds. 5/1997
           Length = 986
           
 Score = 94.0 bits (230), Expect = 6e-18
 Identities = 46/106 (43%), Positives = 70/106 (65%), Gaps = 2/106 (1%)
 Frame = +1

Query: 10  SPLRPQNYLFGCELKAD-KDYHFKVDN-DENEHQLSLRTVSLGAGAKDELHIVEAEAMNY 67
           +P+   ++ FGCEL    + + FKV+  D+ EH L+L  + L  GAKDE ++VE  A ++
Sbjct: 139 APVTMDSFFFGCELSGHTRSFTFKVEEEDDTEHVLALNMLCLTEGAKDECNVVEVVARDH 318

Query: 68  EGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQH 115
           +   I V +A L++S QP +S+  F++ PPV  RLK GSGPV I+G+H
Sbjct: 319 DNQEIAVPVANLRLSCQPMLSVDDFQLQPPVTFRLKSGSGPVRITGRH 462


Alignment of npm_human.sw to GB_HTG2:AC007174
	AC007174 Homo sapiens, clone hRPK.93_A_1, WORKING DRAFT
              SEQUENCE, 15 unordered pieces. 3/1999
              Length = 252026
              
 Score = 93.6 bits (229), Expect = 7e-18
 Identities = 68/162 (41%), Positives = 71/162 (42%)
 Frame = +1

Query: 47     VSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGS 106
              VSLG G K+ELHIVEAEAMNYEGSP K+TLATLK SVQP   L   +   P         
Sbjct: 218770 VSLGTGTKNELHIVEAEAMNYEGSPFKLTLATLKTSVQPQFPLRALKYHHPYSYS*SVVQ 218949

Query: 107    GPVHISGQHLXXXXXXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVKLXXXXXXXX 166
                  ISGQHL                 KLL        P GGSK  QKKVKL        
Sbjct: 218950 -EHDISGQHLVAGEKEAESEDEEEEDMKLL------GTPEGGSKFTQKKVKLAADEDDDM 219108

Query: 167    XXXXXXXXXXXXXXXXXXXXXXKAPVKKSIRDTPAKNAQKSN 208
                                    K PVKK I D P KNA K N
Sbjct: 219109 MMQMMMMMMMMMMILMMRKLKKKXPVKKCI*DIPTKNA*K*N 219234


 Score = 55.8 bits (132), Expect = 7e-11
 Identities = 26/30 (86%), Positives = 26/30 (86%)
 Frame = +1

Query: 19     FGCELKADKDYHFKVDNDENEHQLSLRTVS 48
              F CELKADKD H KVDNDEN HQLSLRTVS
Sbjct: 218515 FSCELKADKDDHIKVDNDEN*HQLSLRTVS 218604


 Score = 34.4 bits (77), Expect = 7e-11
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +2

Query: 1      MEDSMDMDMSPLRPQNYL 18
              MED MD+D+SPL PQNYL
Sbjct: 218462 MEDKMDIDVSPLGPQNYL 218515


Alignment of npm_human.sw to GB_RO:MMU64450
	U64450 Mus musculus nucleophosmin/nucleoplasmin-3
           (Npm3) mRNA, complete cds. 5/1997
           Length = 866
           
 Score = 91.7 bits (224), Expect = 3e-17
 Identities = 45/106 (42%), Positives = 69/106 (64%), Gaps = 2/106 (1%)
 Frame = +2

Query: 10  SPLRPQNYLFGCELKAD-KDYHFKVDN-DENEHQLSLRTVSLGAGAKDELHIVEAEAMNY 67
           +P+   ++ FGCEL    + + FKV+  D+ EH L+L  + L  GA DE ++VE  A ++
Sbjct: 95  APVTMDSFFFGCELSGHTRSFTFKVEEEDDTEHVLALNMLCLTEGATDECNVVEVVARDH 274

Query: 68  EGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQH 115
           +   I V +A L++S QP +S+  F++ PPV  RLK GSGPV I+G+H
Sbjct: 275 DNQEIAVPVANLRLSCQPMLSVDDFQLQPPVTFRLKSGSGPVRITGRH 418


Alignment of npm_human.sw to GB_PR1:HUMNUCPHOC
	L15317 Homo sapiens (clone NG4-5) processed
           pseudogene of nucleophosmin/B23, complete repeat unit.
           1/1994
           Length = 1459
           
 Score = 84.7 bits (206), Expect = 4e-15
 Identities = 48/72 (66%), Positives = 51/72 (70%)
 Frame = +1

Query: 223 KGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQE 282
           K QESFKK+EKT  T K         +K  +  EKGGSLPKVE  FINYVKNCF MTDQE
Sbjct: 730 KRQESFKKEEKTENT-KRI*FCRRY*SKNGSKGEKGGSLPKVETTFINYVKNCFWMTDQE 906

Query: 283 AIQDLWQWRKSL 294
           AIQDLWQ RKSL
Sbjct: 907 AIQDLWQ*RKSL 942


 Score = 57.8 bits (137), Expect = 7e-17
 Identities = 42/107 (39%), Positives = 51/107 (47%)
 Frame = +1

Query: 10  SPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEG 69
           +P  P+        +  KDY   +DNDEN HQ              E  I + + +N   
Sbjct: 154 AP*GPRTIFLVVN*RLTKDY---LDNDENVHQFR---------GWCEE*IEQRQ*INEGN 297

Query: 70  SPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL 116
              K      K      VSLGGFEITPPV+LRLKC SGPVH SGQ +
Sbjct: 298 DNSK*HRQL*KCLHSQLVSLGGFEITPPVLLRLKCSSGPVHNSGQQV 438


 Score = 55.4 bits (131), Expect = 2e-06
 Identities = 31/51 (60%), Positives = 34/51 (65%)
 Frame = +3

Query: 189 KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPK 239
           K  VKKSI DTPAK AQKSN+NGKDSKP STP  K     +K+ K  K  K
Sbjct: 630 KQQVKKSIPDTPAKKAQKSNENGKDSKP-STPSIKKTRILQKRRKN*KHQK 779


 Score = 53.1 bits (125), Expect = 7e-17
 Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
 Frame = +2

Query: 134 KLLSISGKR-SAPGGGSKVPQKKVKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAPV 192
           +L S+SGK  +APGGGSK+ +KK+ L                              KA  
Sbjct: 497 RLSSVSGKAVAAPGGGSKIYRKKLLLMKKKKKMMMMKMMRKLKK------------KAAS 640

Query: 193 KKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQ 252
           ++      ++ + +  +  K  K  +T   K +   KK++K  KTPKG SSVEDIKAKM 
Sbjct: 641 EEIYTRYSSQKSTEVKREWKRLKTINTKHKKDKNPSKKKKKL-KTPKGSSSVEDIKAKMG 817

Query: 253 ASIEKGGSLPK 263
           A ++K    PK
Sbjct: 818 ARVKKVVLFPK 850


 Score = 52.7 bits (124), Expect = 1e-05
 Identities = 22/27 (81%), Positives = 26/27 (95%)
 Frame = +3

Query: 1   MEDSMDMDMSPLRPQNYLFGCELKADK 27
           MED +DM++SPLRPQNYLFGCELKAD+
Sbjct: 126 MEDLVDMEVSPLRPQNYLFGCELKADQ 206


Alignment of npm_human.sw to GB_PR3:AC007159
	AC007159 Homo sapiens, clone 2_A_4, complete sequence.
             3/1999
             Length = 155021
             
 Score = 83.1 bits (202), Expect = 9e-17
 Identities = 55/112 (49%), Positives = 58/112 (51%)
 Frame = +3

Query: 47    VSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGS 106
             VSLG G K+ELHIVEAEAMNYEGSP K+TLATLK SVQP   L   +   P         
Sbjct: 32490 VSLGTGTKNELHIVEAEAMNYEGSPFKLTLATLKTSVQPQFPLRALKYHHPYSYS*SVVQ 32669

Query: 107   GPVHISGQHLXXXXXXXXXXXXXXXXXKLLSISGKRSAPGGGSKVPQKKVKL 158
                 ISGQHL                 KLL        P GGSK  QKKVKL
Sbjct: 32670 -EHDISGQHLVAGEKEAESEDEEEEDMKLL------GTPEGGSKFTQKKVKL 32804


 Score = 55.8 bits (132), Expect = 9e-11
 Identities = 26/30 (86%), Positives = 26/30 (86%)
 Frame = +2

Query: 19    FGCELKADKDYHFKVDNDENEHQLSLRTVS 48
             F CELKADKD H KVDNDEN HQLSLRTVS
Sbjct: 32237 FSCELKADKDDHIKVDNDEN*HQLSLRTVS 32326


 Score = 34.4 bits (77), Expect = 9e-11
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +3

Query: 1     MEDSMDMDMSPLRPQNYL 18
             MED MD+D+SPL PQNYL
Sbjct: 32184 MEDKMDIDVSPLGPQNYL 32237


 Score = 27.4 bits (59), Expect = 9e-17
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = +2

Query: 189   KAPVKKSIRDTPAKNAQKSN 208
             KAPVKK I D P KNA K N
Sbjct: 32894 KAPVKKCI*DIPTKNA*K*N 32953


Alignment of npm_human.sw to GB_RO:RATNUCBA2
	M37036 Rat nucleolar proteins B23.1 and B23.2.
           1/1991
           Length = 1800
           
 Score = 83.9 bits (204), Expect = 6e-15
 Identities = 42/42 (100%), Positives = 42/42 (100%)
 Frame = +1

Query: 47  VSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVS 88
           VSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVS
Sbjct: 517 VSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVS 642


 Score = 66.3 bits (159), Expect = 1e-09
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = +1

Query: 87  VSLGGFEITPPVVLRLKCGSGPVHISGQHL 116
           VSLGGFEITPPVVLRLKCGSGPVHISGQHL
Sbjct: 835 VSLGGFEITPPVVLRLKCGSGPVHISGQHL 924


 Score = 64.0 bits (153), Expect = 6e-09
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = +1

Query: 20  GCELKADKDYHFKVDNDENEHQLSLRTV 47
           GCELKADKDYHFKVDNDENEHQLSLRTV
Sbjct: 154 GCELKADKDYHFKVDNDENEHQLSLRTV 237


 Score = 40.2 bits (92), Expect = 0.084
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = +1

Query: 134  KLLSISGKRSAPGGGSKVPQKK 155
            KLL +SGKRSAPGGG+KVPQ K
Sbjct: 1384 KLLGMSGKRSAPGGGNKVPQVK 1449


Alignment of npm_human.sw to GB_PR2:HSMNPP03
	U89311 Homo sapiens nucleophosmin phosphoprotein
           (NPM) gene, exons 3 - 6. 1/1998
           Length = 2408
           
 Score = 82.3 bits (200), Expect = 2e-14
 Identities = 41/41 (100%), Positives = 41/41 (100%)
 Frame = +2

Query: 47  VSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTV 87
           VSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTV
Sbjct: 416 VSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTV 538


 Score = 66.3 bits (159), Expect = 1e-09
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = +1

Query: 87  VSLGGFEITPPVVLRLKCGSGPVHISGQHL 116
           VSLGGFEITPPVVLRLKCGSGPVHISGQHL
Sbjct: 817 VSLGGFEITPPVVLRLKCGSGPVHISGQHL 906


 Score = 43.4 bits (100), Expect = 0.010
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +3

Query: 134  KLLSISGKRSAPGGGSKVPQKKVKL 158
            KLLSISGKRSAPGGGSKVPQ ++ +
Sbjct: 1869 KLLSISGKRSAPGGGSKVPQVEMAI 1943


Alignment of npm_human.sw to GB_PR2:HSMNPP09
	U89317 Homo sapiens nucleophosmin phosphoprotein
           (NPM) gene, exon 9. 1/1998
           Length = 703
           
 Score = 71.4 bits (172), Expect = 3e-11
 Identities = 34/35 (97%), Positives = 35/35 (99%)
 Frame = +1

Query: 223 KGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEK 257
           +GQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEK
Sbjct: 343 QGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEK 447


Alignment of npm_human.sw to GB_RO:RATNUCBA4
	M37038 Rat nucleolar proteins B23.1 and B23.2.
           1/1991
           Length = 540
           
 Score = 71.4 bits (172), Expect = 3e-11
 Identities = 34/35 (97%), Positives = 35/35 (99%)
 Frame = +3

Query: 223 KGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEK 257
           +GQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEK
Sbjct: 204 QGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEK 308


Alignment of npm_human.sw to GB_RO:RATB23
	J04944 Rat nucleolar protein B23.2 gene, complete cds.
           6/1990
           Length = 3984
           
 Score = 71.4 bits (172), Expect = 3e-11
 Identities = 34/35 (97%), Positives = 35/35 (99%)
 Frame = +1

Query: 223 KGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEK 257
           +GQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEK
Sbjct: 415 QGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEK 519


 Score = 57.0 bits (135), Expect = 8e-07
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +3

Query: 258  GGSLPKVEAKFINYVKNCFRMTDQEAIQ 285
            GGSLPKVEAKFINYVKNCFRMTDQE  +
Sbjct: 2301 GGSLPKVEAKFINYVKNCFRMTDQEVTE 2384


 Score = 33.6 bits (75), Expect = 8.3
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = +1

Query: 270  NYVKNCFRMTDQEAIQDLWQWRKSL 294
            N++K  F      AIQDLWQWRKSL
Sbjct: 3205 NFIKLTFLYHFS*AIQDLWQWRKSL 3279


Alignment of npm_human.sw to GB_PR2:S82740
	S82740 NPM/ALK=fusion gene {translocation breakpoint}
           [human, lymphoma cells SUP-M2, Genomic, 1565 nt]. 2/1997
           Length = 1565
           
 Score = 64.8 bits (155), Expect = 3e-09
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = +1

Query: 88  SLGGFEITPPVVLRLKCGSGPVHISGQHL 116
           SLGGFEITPPVVLRLKCGSGPVHISGQHL
Sbjct: 1   SLGGFEITPPVVLRLKCGSGPVHISGQHL 87


Alignment of npm_human.sw to GB_PR2:S82725
	S82725 NPM/ALK=fusion gene {translocation breakpoint}
           [human, lymphoma cells SU-DHL-1, Genomic, 1679 nt].
           2/1997
           Length = 1679
           
 Score = 64.8 bits (155), Expect = 3e-09
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = +1

Query: 88  SLGGFEITPPVVLRLKCGSGPVHISGQHL 116
           SLGGFEITPPVVLRLKCGSGPVHISGQHL
Sbjct: 1   SLGGFEITPPVVLRLKCGSGPVHISGQHL 87


Alignment of npm_human.sw to GB_PR2:HSMNPP02
	U89310 Homo sapiens nucleophosmin phosphoprotein
           (NPM) gene, exon 2. 1/1998
           Length = 1154
           
 Score = 64.0 bits (153), Expect = 6e-09
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = +3

Query: 20  GCELKADKDYHFKVDNDENEHQLSLRTV 47
           GCELKADKDYHFKVDNDENEHQLSLRTV
Sbjct: 837 GCELKADKDYHFKVDNDENEHQLSLRTV 920


Alignment of npm_human.sw to GB_PR2:HSMNPP06
	U89314 Homo sapiens nucleophosmin phosphoprotein
           (NPM) gene, exon 8. 1/1998
           Length = 608
           
 Score = 62.5 bits (149), Expect = 2e-08
 Identities = 29/30 (96%), Positives = 30/30 (99%)
 Frame = +1

Query: 194 KSIRDTPAKNAQKSNQNGKDSKPSSTPRSK 223
           +SIRDTPAKNAQKSNQNGKDSKPSSTPRSK
Sbjct: 199 QSIRDTPAKNAQKSNQNGKDSKPSSTPRSK 288


Alignment of npm_human.sw to GB_IN1:LPU76750
	U76750 Lytechinus pictus mitotic apparatus protein
           p62 mRNA, complete cds. 2/1997
           Length = 3374
           
 Score = 62.1 bits (148), Expect = 2e-08
 Identities = 37/101 (36%), Positives = 61/101 (59%), Gaps = 13/101 (12%)
 Frame = +3

Query: 15  QNYLFGCELKADK---------DYHFKVDNDENE---HQLSLRTVSLGAGAKDE-LHIVE 61
           + Y +G  L  DK         D+    D+DE +   H L L+   LG  AKD+  +++E
Sbjct: 180 KEYFWGATLSKDKKIFKWDPESDFLDDEDDDEEDSISHFLFLKQAVLGVNAKDDDRNVIE 359

Query: 62  AEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQH 115
            E +N++G  +   L +L++ +  + +L    + PPV  +L  GSGPV++SGQH
Sbjct: 360 VETINFDGETVIQPLLSLRLGLNESTNLD-IGLQPPVTFKLALGSGPVYLSGQH 518


 Score = 54.7 bits (129), Expect = 4e-06
 Identities = 36/94 (38%), Positives = 51/94 (53%)
 Frame = +3

Query: 200  PAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKGG 259
            PAK A K   NG  +KP  TP+S+  +  K+        K   S+ED+K      + K  
Sbjct: 1149 PAKKA-KGKVNGT-AKPKGTPKSQANKGMKE--------KKTYSLEDMKQ----DLIKSP 1286

Query: 260  SLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKS 293
            S PK E KF N+VK+ F +++ + IQ+LW W KS
Sbjct: 1287 SKPKKEEKFKNFVKSKFHLSEGKKIQELWGWYKS 1388


Alignment of npm_human.sw to GB_OV:CHKNP2
	J03165 Chicken nucleolar protein B23/No38 mRNA, 3'
           end. 4/1994
           Length = 166
           
 Score = 58.2 bits (138), Expect = 3e-07
 Identities = 24/34 (70%), Positives = 28/34 (81%)
 Frame = +1

Query: 261 LPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL 294
           LPK+E KF NYVKNCFR  DQ+ IQ LWQWR++L
Sbjct: 1   LPKLEPKFANYVKNCFRTEDQKVIQALWQWRQTL 102


Alignment of npm_human.sw to GB_PR2:HSMNPP11
	U89319 Homo sapiens nucleophosmin phosphoprotein
           (NPM) gene, exon 11. 1/1998
           Length = 393
           
 Score = 57.8 bits (137), Expect = 4e-07
 Identities = 26/31 (83%), Positives = 26/31 (83%)
 Frame = +2

Query: 258 GGSLPKVEAKFINYVKNCFRMTDQEAIQDLW 288
           GGSLPKVEAKFINYVKNCFRMTDQE     W
Sbjct: 59  GGSLPKVEAKFINYVKNCFRMTDQEVNWIFW 151


Alignment of npm_human.sw to GB_RO:RATNUCBA6
	M37040 Rat nucleolar proteins B23.1 and B23.2.
           1/1991
           Length = 540
           
 Score = 57.0 bits (135), Expect = 8e-07
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +2

Query: 258 GGSLPKVEAKFINYVKNCFRMTDQEAIQ 285
           GGSLPKVEAKFINYVKNCFRMTDQE  +
Sbjct: 230 GGSLPKVEAKFINYVKNCFRMTDQEVTE 313


Alignment of npm_human.sw to GB_RO:RATNUCBA3
	M37037 Rat nucleolar proteins B23.1 and B23.2.
           1/1991
           Length = 840
           
 Score = 53.5 bits (126), Expect = 9e-06
 Identities = 26/30 (86%), Positives = 28/30 (92%)
 Frame = +2

Query: 194 KSIRDTPAKNAQKSNQNGKDSKPSSTPRSK 223
           +S+RDTPAKNAQKSNQNGKD KP STPRSK
Sbjct: 539 QSVRDTPAKNAQKSNQNGKDLKP-STPRSK 625


Alignment of npm_human.sw to GB_PR2:HSMNPP01
	U89309 Homo sapiens nucleophosmin phosphoprotein
            (NPM) gene, exon 1. 1/1998
            Length = 1690
            
 Score = 46.5 bits (108), Expect = 0.001
 Identities = 20/20 (100%), Positives = 20/20 (100%)
 Frame = +1

Query: 1    MEDSMDMDMSPLRPQNYLFG 20
            MEDSMDMDMSPLRPQNYLFG
Sbjct: 1318 MEDSMDMDMSPLRPQNYLFG 1377


Alignment of npm_human.sw to GB_RO:RATNUCBA1
	M37035 Rat nucleolar proteins B23.1 and B23.2.
           1/1991
           Length = 1140
           
 Score = 46.5 bits (108), Expect = 0.001
 Identities = 20/20 (100%), Positives = 20/20 (100%)
 Frame = +1

Query: 1   MEDSMDMDMSPLRPQNYLFG 20
           MEDSMDMDMSPLRPQNYLFG
Sbjct: 901 MEDSMDMDMSPLRPQNYLFG 960


Alignment of npm_human.sw to GB_IN2:DMU59498
	U59498 Drosophila melanogaster nucleoplasmin-like
           protein (dNLP) mRNA, complete cds. 10/1996
           Length = 587
           
 Score = 37.1 bits (84), Expect = 0.73
 Identities = 32/106 (30%), Positives = 52/106 (48%), Gaps = 3/106 (2%)
 Frame = +3

Query: 11  PLRPQNYLFGCELKADKD-YHFKVDNDENEHQ-LSLRTVSLGAGAKD-ELHIVEAEAMNY 67
           P   +   +G  L A+ D   + VD D    Q L ++ + LGA AK+ E ++VE   +N 
Sbjct: 12  PTMAEESFYGVTLTAESDSVTWDVDEDYARGQKLVIKQILLGAEAKENEFNVVE---VNT 182

Query: 68  EGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL 116
               +++ +A LK      V+         V  +L  GSGPV+I G ++
Sbjct: 183 PKDSVQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPVYIHGHNI 329


Alignment of npm_human.sw to GB_IN1:CEU33058
	U33058 Caenorhabditis elegans UNC-89 (unc-89) gene,
             complete cds. 5/1996
             Length = 46638
             
 Score = 36.7 bits (83), Expect = 0.96
 Identities = 27/79 (34%), Positives = 38/79 (47%), Gaps = 2/79 (2%)
 Frame = +2

Query: 189   KAPVKK--SIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVED 246
             K+PVKK  S      K A  + +     KP+S P  K +   K   K  K+P+  S VE+
Sbjct: 25313 KSPVKKEKSPEKVEEKPASPTKKEKSPEKPAS-PTKKSENEVKSPTKKEKSPE-KSVVEE 25486

Query: 247   IKAKMQASIEKGGSLPKVEAK 267
             +K+  + S EK    PK   K
Sbjct: 25487 LKSPKEKSPEKADDKPKSPTK 25549


 Score = 35.6 bits (80), Expect = 2.1
 Identities = 19/64 (29%), Positives = 33/64 (50%), Gaps = 4/64 (6%)
 Frame = +2

Query: 189   KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTP----KGPSSV 244
             K+P  + ++    K    S+   K+  PSS  +  G E   K++  PK+P    K P   
Sbjct: 24899 KSPAAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKTGDE--VKEKSPPKSPTKKEKSPEKP 25072

Query: 245   EDIKAKMQ 252
             ED+K+ ++
Sbjct: 25073 EDVKSPVK 25096


Alignment of npm_human.sw to GB_HTG1:AC006780
	AC006780 Caenorhabditis elegans clone Y47D9A, WORKING
              DRAFT SEQUENCE, 4 unordered pieces. 2/1999
              Length = 299719
              
 Score = 36.7 bits (83), Expect = 0.96
 Identities = 27/79 (34%), Positives = 38/79 (47%), Gaps = 2/79 (2%)
 Frame = +3

Query: 189    KAPVKK--SIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVED 246
              K+PVKK  S      K A  + +     KP+S P  K +   K   K  K+P+  S VE+
Sbjct: 122538 KSPVKKEKSPEKVEEKPASPTKKEKSPEKPAS-PTKKSENEVKSPTKKEKSPE-KSVVEE 122711

Query: 247    IKAKMQASIEKGGSLPKVEAK 267
              +K+  + S EK    PK   K
Sbjct: 122712 LKSPKEKSPEKADDKPKSPTK 122774


 Score = 35.6 bits (80), Expect = 2.1
 Identities = 19/64 (29%), Positives = 33/64 (50%), Gaps = 4/64 (6%)
 Frame = +3

Query: 189    KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTP----KGPSSV 244
              K+P  + ++    K    S+   K+  PSS  +  G E   K++  PK+P    K P   
Sbjct: 122124 KSPAAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKTGDE--VKEKSPPKSPTKKEKSPEKP 122297

Query: 245    EDIKAKMQ 252
              ED+K+ ++
Sbjct: 122298 EDVKSPVK 122321


Alignment of npm_human.sw to GB_HTG1:AC006858
	AC006858 Caenorhabditis elegans clone Y47D9X, WORKING
              DRAFT SEQUENCE, 4 unordered pieces. 2/1999
              Length = 299719
              
 Score = 36.7 bits (83), Expect = 0.96
 Identities = 27/79 (34%), Positives = 38/79 (47%), Gaps = 2/79 (2%)
 Frame = +3

Query: 189    KAPVKK--SIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVED 246
              K+PVKK  S      K A  + +     KP+S P  K +   K   K  K+P+  S VE+
Sbjct: 122538 KSPVKKEKSPEKVEEKPASPTKKEKSPEKPAS-PTKKSENEVKSPTKKEKSPE-KSVVEE 122711

Query: 247    IKAKMQASIEKGGSLPKVEAK 267
              +K+  + S EK    PK   K
Sbjct: 122712 LKSPKEKSPEKADDKPKSPTK 122774


 Score = 35.6 bits (80), Expect = 2.1
 Identities = 19/64 (29%), Positives = 33/64 (50%), Gaps = 4/64 (6%)
 Frame = +3

Query: 189    KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTP----KGPSSV 244
              K+P  + ++    K    S+   K+  PSS  +  G E   K++  PK+P    K P   
Sbjct: 122124 KSPAAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKTGDE--VKEKSPPKSPTKKEKSPEKP 122297

Query: 245    EDIKAKMQ 252
              ED+K+ ++
Sbjct: 122298 EDVKSPVK 122321


Alignment of npm_human.sw to GB_IN1:CELC09D1
	AF003131 Caenorhabditis elegans cosmid C09D1. 5/1997
             Length = 53848
             
 Score = 36.7 bits (83), Expect = 0.96
 Identities = 27/79 (34%), Positives = 38/79 (47%), Gaps = 2/79 (2%)
 Frame = +2

Query: 189   KAPVKK--SIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVED 246
             K+PVKK  S      K A  + +     KP+S P  K +   K   K  K+P+  S VE+
Sbjct: 31223 KSPVKKEKSPEKVEEKPASPTKKEKSPEKPAS-PTKKSENEVKSPTKKEKSPE-KSVVEE 31396

Query: 247   IKAKMQASIEKGGSLPKVEAK 267
             +K+  + S EK    PK   K
Sbjct: 31397 LKSPKEKSPEKADDKPKSPTK 31459


 Score = 35.6 bits (80), Expect = 2.1
 Identities = 19/64 (29%), Positives = 33/64 (50%), Gaps = 4/64 (6%)
 Frame = +2

Query: 189   KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTP----KGPSSV 244
             K+P  + ++    K    S+   K+  PSS  +  G E   K++  PK+P    K P   
Sbjct: 30809 KSPAAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKTGDE--VKEKSPPKSPTKKEKSPEKP 30982

Query: 245   EDIKAKMQ 252
             ED+K+ ++
Sbjct: 30983 EDVKSPVK 31006


Alignment of npm_human.sw to GB_IN1:DMCRP1
	X99293 D.melanogaster mRNA for CRP1 protein. 7/1996
           Length = 859
           
 Score = 35.6 bits (80), Expect = 2.1
 Identities = 31/98 (31%), Positives = 50/98 (50%), Gaps = 3/98 (3%)
 Frame = +3

Query: 19  FGCELKADKD-YHFKVDNDENEHQ-LSLRTVSLGAGAKD-ELHIVEAEAMNYEGSPIKVT 75
           +G  L A+ D   + VD D    Q L ++ + LGA AK+ E ++VE   +N     +++ 
Sbjct: 27  YGVTLTAESDSVTWDVDEDYARGQKLVIKQILLGAEAKENEFNVVE---VNTPKDSVQIP 197

Query: 76  LATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHL 116
           +A LK      V+         V  +L  GSGPV+I G ++
Sbjct: 198 IAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPVYIHGHNI 320


Alignment of npm_human.sw to GB_OM:AF091342
	AF091342 Bos taurus neurofilament-M subunit (NF-M)
            mRNA, partial cds. 9/1998
            Length = 2944
            
 Score = 35.2 bits (79), Expect = 2.8
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
 Frame = +1

Query: 189  KAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTP--KTPKGPSSVED 246
            K+P  KS    P   +  +      S  + +P +K   +     K+P  K+P   S VE+
Sbjct: 1582 KSPTAKS----PTAKSPVAKSPTAKSPEAKSPEAKSPTAKSPTAKSPAAKSPAPKSPVEE 1749

Query: 247  IKAKMQASIEKGGSLPKVE 265
            +K K +A  EKG    KVE
Sbjct: 1750 VKPKAEAGAEKGEQKEKVE 1806


Alignment of npm_human.sw to GB_PL1:OSU07338
	U07338 Oryza sativa pyruvate decarboxylase (pdc3)
            gene, complete cds. 6/1995
            Length = 3044
            
 Score = 34.8 bits (78), Expect = 3.7
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = +1

Query: 199  TPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSS 243
            +PA     S++ G  ++P+STPRS    +   +  +P + +GPSS
Sbjct: 1651 SPATRCPTSSRRGSPTRPASTPRSTPPSTSSTRPSSPCSSRGPSS 1785


Alignment of npm_human.sw to GB_PR1:HSU18985
	U18985 Human triadin mRNA, complete cds. 9/1995
            Length = 2947
            
 Score = 34.4 bits (77), Expect = 4.8
 Identities = 20/66 (30%), Positives = 37/66 (55%), Gaps = 5/66 (7%)
 Frame = +2

Query: 201  AKNAQKSNQNGKDSKPSSTPRSKGQESFKKQE-----KTPKTPKGPSSVEDIKAKMQASI 255
            AK  +K   + K  KP+   + KG++  KK++     K+PK      S + +KAK + + 
Sbjct: 1133 AKKDEKKEDSKKTKKPAEVEQPKGKKQEKKEKHVEPAKSPKKEHSVPSDKQVKAKTERAK 1312

Query: 256  EKGGSLPKVEA 266
            E+ G++   +A
Sbjct: 1313 EEIGAVSSKKA 1345


Alignment of npm_human.sw to GB_PR3:AC005263
	AC005263 Homo sapiens chromosome 19, cosmid F20489,
           complete sequence. 9/1998
           Length = 35737
           
 Score = 33.6 bits (75), Expect = 8.3
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = -2

Query: 210 NGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKGGSL 261
           +G  SKP+ST +   Q S +   ++PK    P S+   + KM  SI  G +L
Sbjct: 510 HGPKSKPTSTQKPGPQRSQQNDSQSPKQGIKPGSINWARMKMAHSIHTGNAL 355


Alignment of npm_human.sw to GB_PL1:SCU40082
	U40082 Saccharomycopsis capsularis 26S ribosomal
           RNA gene, partial sequence. 7/1996
           Length = 568
           
 Score = 33.6 bits (75), Expect = 8.3
 Identities = 19/48 (39%), Positives = 25/48 (51%)
 Frame = -3

Query: 194 KSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGP 241
           +S+R  P  NAQ S    + S+  +TPR K      K+  TPKT  GP
Sbjct: 560 RSLRQYPCNNAQSSVSGNRSSQGYNTPRRK---LHSKRCSTPKTDIGP 426


Alignment of npm_human.sw to GB_RO:RATNUCBA7
	M37041 Rat nucleolar proteins B23.1 and B23.2.
           1/1991
           Length = 757
           
 Score = 33.6 bits (75), Expect = 8.3
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = +3

Query: 270 NYVKNCFRMTDQEAIQDLWQWRKSL 294
           N++K  F      AIQDLWQWRKSL
Sbjct: 174 NFIKLTFLYHFS*AIQDLWQWRKSL 248


Alignment of npm_human.sw to GB_PR2:AC004490
	AC004490 Homo sapiens chromosome 19, cosmid R29381,
             complete sequence. 9/1998
             Length = 39143
             
 Score = 33.6 bits (75), Expect = 8.3
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = -1

Query: 210   NGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKGGSL 261
             +G  SKP+ST +   Q S +   ++PK    P S+   + KM  SI  G +L
Sbjct: 38435 HGPKSKPTSTQKPGPQRSQQNDSQSPKQGIKPGSINWARMKMAHSIHTGNAL 38280