Banbury Cross http://igs-server.cnrs-mrs.fr/igs/banbury
FGENEH http://genomic.sanger.ac.uk/gf/gf.shtml
GeneID http://www1.imim.es/geneid.html
GeneMachine http://genome.nhgri.nih.gov/genemachine
GeneParser http://beagle.colorado.edu/_eesnyder/GeneParser.htl
GENSCAN http://genes.mit.edu/GENSCAN.html
Genotator http://www.fruitfly.org/_nomi/genotator/
GRAIL http://compbio.ornl.gov/tools/index.shtml
GRAIL-EXP http://compbio.ornl.gov/grailexp/
HMMgene http://www.cbs.dtu.dk/services/HMMgene/
MZEF http://www.cshl.org/genefinder
PROCRUSTES http://www-hto.usc.edu/software/procrustes
RepeatMasker http://ftp.genome.washington.edu/RM/RepeatMasker.html
Sputnik http://rast.abajian.com/sputnik/