Build
Your Own Database
Blast
xp132341.pep
gcgtoblast combines any set of GCG
sequences into a database that you can
search with BLAST.
GCGTOBLAST
of what input sequence(s) ? *.pep
What
should I call the database ? cdk2psq
Change
xp132341 to gcg format
blast -BAT -IN2=cdk2psq
BLAST
searches one or more nucleic acid or protein databases
for
sequences similar to one or more query sequences of any
type.
BLAST can produce gapped alignments for the matches it
finds.
Blast with what query sequence(s) ? xp132341.pep