Programs used in this exercise:
(1) Sequence manipulation – reverse
(3) ORF Searching – frames , map , translate
(4) Mapping (restriction sites)
– map
(-minc, -maxc), mapsort(-exclude, -digest),
mapplot, plasmidmap
(5) Mapping (transcription factor)
–
map(tfsites).
Sequences used in this exercise:
gb:z18853 (C.elegans
mRNA for capping protein alpha subunit.)
cds:10-858
gb:x03795 (Human mRNA for platelet
derived growth factor A-chain, PDGF-A) cds:388-1020.