Build Your Own
Database
Blast
xp132341.pep
formatdb+
is
a program that allows the user to do convert the input sequences into GCG compatible
databases that can be used in alignment programs like BLAST.
formatdb+ of what sequence(s)
? *.pep
What should I call the
database? cdk2psq
Change xp132341 to gcg
format
blast -BAT
-IN2=cdk2psq
BLAST searches one or more
nucleic acid or protein databases
for sequences similar to one
or more query sequences of any
type. BLAST can produce gapped
alignments for the matches it
finds.
Blast with what query sequence(s) ? xp132341.pep