[a,b] specifies a range
of fragments.
[x,y] specifies a range
of bases.
[n] is an optional
numeric parameter.
EDit
[ContigName]
replace current contig with a new contig
CONTIGs
select another contig for editing
WRite
write a contig to the database
EXit
write the contig and quit
QUIT
quit without writing
ERASE
delete current contig from the database
238
move to position 238 in the current fragment
[x,y] PRETTYout
[FileName] write the sequence
alignment [position x - y]
[a,b] SEQOUT
write fragments [a - b] to sequence files
BIGPICture
[FileName] write bar schematic to an output file
OVERstrike
select OVERSTRIKE sequence edit mode
NOOVERstrike
select INSERT sequence edit mode
[x,y] CONSensus
recalculate the consensus sequence
[a,b] LOCk
lock strands [a through b]
[a,b] Unlock
unlock strands [a through b]
[x,y] SELect
select bases [x through y]
REMove
remove the selected bases
[n] INSert
insert the removed bases [at position n]
CAncel
cancel the selection