Tree Generation Flowchart
outfile
outfile
intree
outtree
NEIGHBOR.EXE
SEQBOOT.EXE
CONSENSE.EXE
outfile
infile
infile
infile
outfile
outfile
DNADIST.EXE
PROTDIST.EXE
DNAPARS.EXE
PROTPARS.EXE
treefile
intree
Character-Based
Methods
1.Maximum
Parsimony (MP).
2.Maximum
Likelihood (ML).
Distance-Based
Methods
1.Unweighted
Pair Group Method with ArithmeticMean (UPGMA).
2.Neighbor
Joining (NJ).
3.Fitch-Margoliash
(FM).
4.Minimum
Evolution (ME).