Subtractive hybridization
Subtractive hybridization (or subtraction) is a method for rapid isolation of differentially distributed nucleic acids (differentially expressed, differentially present, or differentially arranged in two or more different sources: different cells, cell populations or cell types, different tissues, disease, or development stages). The Suppressive subtractive hybridization (SSH) method is designed to selectively amplify differentially expressed transcripts while suppressing the amplification of abundant transcripts, thus eliminating the need to separate single- and double-stranded molecules.
Limitations
Øonly to pair-wise treatment comparisons
Ødoes not provide a quantitative measure of expression differences