Trichomonas
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(1)   Shaio MF, Lin PR, Lee CS, Hou SC, Tang P, Yang KD. (1992) A novel neutrophil-activating factor released by Trichomonas vaginalis. Infect Immun. 60:4475-82.

(2)   Carlton JM, Hirt RP, Silva JC, Delcher AL, Schatz M, Zhao Q, Wortman JR, Bidwell SL, Alsmark UC, Besteiro S, Sicheritz-Ponten T, Noel CJ, Dacks JB, Foster PG, Simillion C, Van de Peer Y, Miranda-Saavedra D, Barton GJ, Westrop GD, Müller S, Dessi D, Fiori PL, Ren Q, Paulsen I, Zhang H, Bastida-Corcuera FD, Simoes-Barbosa A, Brown MT, Hayes RD, Mukherjee M, Okumura CY, Schneider R, Smith AJ, Vanacova S, Villalvazo M, Haas BJ, Pertea M, Feldblyum TV, Utterback TR, Shu CL, Osoegawa K, de Jong PJ, Hrdy I, Horvathova L, Zubacova Z, Dolezal P, Malik SB, Logsdon JM Jr, Henze K, Gupta A, Wang CC, Dunne RL, Upcroft JA, Upcroft P, White O, Salzberg SL, Tang P, Chiu CH, Lee YS, Embley TM, Coombs GH, Mottram JC, Tachezy J, Fraser-Liggett CM, Johnson PJ. (2007) Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis. SCIence 315(5809):207-12. 

(3)   Shin YM, Fu YC, Xu MY, Xu XY, Xu JJ, Tang P. (2007) Molecular Cloning and Characterization of Two Hommologues of Yeast Sir2 Gene in the Parasitic Protist Trichomonas vaginalis. J. Trop. Med. 7(4):297-302.

(4)   Tang P*, Huang CC, Shin JW, Zhang RL, Liu JL, Fu YC (2007) Induction of Apoptotic-like Cell Death in Trichomonas vaginalis by Metronidazole. J. Trop. Med. 7(9):837-841.

(5)   Chen K, Meng Q, Ma L, Liu Q, Tang P, Chiu C, Hu S, Yu J. (2008) A novel DNA sequence periodicity decodes nucleosome positioning. Nucleic Acids Res. 36:6228-6236.

(6)  Noël CJ, Diaz N, Sicheritz-Ponten T, Safarikova L, Tachezy J, Tang P, Fiori PL, Hirt RP. (2010) Trichomonas vaginalis BspA-like vast gene family: evidence for functional diversity. BMC Genomics 11:99.

(7)Ma L, Meng Q, Cheng W, Sung Y, Tang P, Hu S, Yu J*. (2011) Involvement of the GP63 protease in infection of Trichomonas vaginalis. Parasitol Res. 109(1):71-79

(8)Huang PJ, Lin WC, Chen SC, Lin YH, Sun CH, Lyu PC, Tang P*. (2012) Identification of putative miRNA from the deep-branching unicellular flagellates. Genomics 99(2):101-7.

(9)Yu DL, Wang Y, Fang X, Hu SN, Tang P and Fu Y* (2012) cquisition of hydrogenosomal presequences: examples from Trichomonas vaginalis. FEMS Microbiology Letters 330(2):127-31.

(10)Yeh YM, Huang KY, Gan RRC, Huang HD, Wang TC, Tang P*. (2012) Phosphoproteome profiling of the sexually transmitted pathogen Trichomonas vaginalis. J. Microbiol. Infect. Immunol. [doi:10.1016/j.jmii.2012.07.010]

(11)Huang KY, Huang PJ, Ku FM, Lin R. Alderete JF, Tang P* (2012) Comparative transcriptomic and proteomic analyses of Trichomonas vaginalis following adherence to Fibronectin. Infect. Immun. [doi:10.1128/IAI.00611-12]

(12)Horváthová L, Šafaříková L, Basler M, Hrdý I, Campo NB, Shin JW, Huang KY, Huang PJ, Lin R, Tang P*, Tachezy J*. (2012) Transcriptomic identification of iron-regulated and iron-independent gene copies within the heavily duplicated Trichomonas vaginalis genome. Genome Biol. Evol. [accepted]

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Bacteria Genomics & Biology
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(1)   Chiu CH, Tang P, Chu C, Hu S, Bao Q, Yu J, Chou YY, Wang HS, Lee YS. (2005) The genome sequence of Salmonella enterica serovar Choleraesuis, a highly invasive and resistant zoonotic pathogen. Nucleic Acids Res. 2005;33(7):2351.

(2)   Yu H, Wang J, Ye J, Tang P, Chu C, Hu S, Chiu CH. (2006) Complete nucleotide sequence of pSCV50, the virulence plasmid of Salmonella enterica serovar Choleraesuis SC-B67. Plasmid. 55(2):145-51.

(3)   Lin PY, Chiu CH, Chu C, Tang P, Su LH. (2006) Invasion of murine respiratory tract epithelial cells by Chryseobacterium meningosepticum and identification of genes present specifically in an invasive strain. New Microbiol. 29(1):55-62.

(4)   Kao CM, Hseu YC, Huang YL, Tang P, Chen SC. (2007) Inhibition of Cyanide-Insensitive Respiration in Klebsiella oxytoca SYSU-011 by 8-Hydroxyquinolone. Curr Microbiol. 54(3):190-194.

(5)   Tang P*, Liu JK, Chou SM,1, Hor LI, Chen WJ, Chen SC (2008) A proteomic analysis of Klebsiella oxytoca after exposure to succinonitrile. Process Biochemistry 43:753V757.

(6)   Ding F, Tang P*, Hsu MH, Cui P, Hu SN, Yu J, Chiu CH (2009) Genome Evolution Driven by Host Adaptations Results in a More Virulent and Resistant Streptococcus pneumoniae Serotype 14. BMC Genomics 10:158

(7)   Feng Y, Hsiao YH, Chen HL, Chu C, Tang P, Chiu CH. (2009) Apoptosis-like cell death induced by Salmonella in Acanthamoeba rhysodes. Genomics. 94(2):132-7

(8)   Tang P*, Hseu YC, Chou HH, Huang KY, Chen SC (2010) Proteomic analysis of the effect of cyanide on Klebsiella oxytoca. Curr. Microbiol. 60(3):224-228.

(9)  Chen WJ, Tang P#, Hseu YC, Chen CC,Huang KY, Chen SC* (2011) A proteome analysis of the tetracyanonickelate (II) responses in Klebsiella oxytoca. Environmental Microbiology Reports. 3(1):106-111

(10)Geng J, Chiu CH, Tang P, ChenY, Shieh HR, Hu SN, and Chen YM*. (2012). Complete genome and transcriptomes of Streptococcus parasanguinis FW213: phylogenic relations and potential virulence mechanisms. PLoS ONE 7(4): e34769.

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Cancer Research
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(1)   Chen CL, Tsui KH, Lin CY, Chang PL, Tang P, Yung BY (2007) Can probability of genetic mutation be an indicator of clinical relevance? Genomics 90(6):746-750.

(2)   Tse KP, Su WH, Chang KP, Tsang NM, Yu CJ, Tang P, See LC, Hsueh C, Yang ML, Hao SP, Li HY, Wang MH, Liao LP, Chen LC, Lin SR, Jorgensen TJ, Chang YS, Shugart YY. (2009) Genome-wide Association Study Reveals Multiple Nasopharyngeal Carcinoma-Associated Loci within the HLA Region at Chromosome 6p21.3. Am J Hum Genet. 85 (2):194-203.

(3)   Tsui KH, Tang P*, Lin CY, Chang PL, Chang CH, Chiu YM, Yung, BYM (2010) Loss of Bikunin in urine as useful marker of bladder carcinoma. J. Urology. 183(1):339-344.

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Virus Research
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(1)   Chen CC, Shou L, Hwang LL, Tang P, Tu WC, Lo HS. (1987) Persistence of hepatitis B viral antigens in Culex quinquefaSCIatus. Southeast Asian J Trop Med Public Health. 18(1):44-51.

(2)   Tang WF, Yang SY, Wu BW, Jheng JR, Chen YL, Shih CH, Lin KH, Lai HC, Tang P, Horng JT. (2007) Reticulon 3 Binds the 2C Protein of Enterovirus 71 and Is Required for Viral Replication. J Biol Chem. 282(8):5888-98.

(3) Chen TH, Tang P#, Yang CF, Kao LH, Lo YP, Chuang CK, Shih YT, Chen WJ* (2011) Antioxidant defense is one of the mechanisms by which mosquito cells survive dengue 2 viral infection. Virology 410(2):410-7

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Bioinformatics
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(1)   Li SC, Tang P, Lin WC. (2007) Intronic microRNA: discovery and biological implications. DNA Cell Biol. 26(4):195-207.

(2)  Huang PJ, Liu YC, Lee CC, Lin WC, Gan RRC ,Lyu PL, Tang P* (2010) DSAP: Deep-Sequencing Small RNA Analysis Pipeline. Nucleic Acids Res. 38 Suppl:W385-91.

(3)  Lin CY, Huang MY, Chu CH, Tang P, Tang C.Y. (2009) Mapping short reads to a genome without using hash look-up table algorithm and Burrows Wheeler Transformation. Proceedings - 2009 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2009 , art. no. 5332100, pp. 232-237.

(4) Chen TW, Gan RRC, Wu TH, Lin WC, Tang P*.(2012) VIP DB -a viral protein domain usage and distribution database. Genomics [doi: j.ygeno.2012.06.008].

(5) Chen TW, Gan RCR, Wu TH, Huang PJ, Lee CY, Chen YYM, Chen CC and Tang P*. (2012) FastAnnotator: an efficient transcript annotation web tool. BMC Genomics [accepted]

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Others
@ (1)   Lin S, Tang P, Hsu SM. (1999) Electrophoresis. Using affinity capillary electrophoresis to evaluate average binding constant of 18-mer diphosphotyrosine peptide to antiphosphotyrosine Fab. 20(17):3388-95.
(2) Tang P, Wang LC* (2011) Uptake and utilization of arachidonic acid in infective larvae of Angiostrongylus cantonensis. J Helminthol. 85(4):395-400.
(3) Chang SH, Tang P, Wang LC*. (2011) A transcriptomic study on the pepsin-activated infective larvae of Angiostrongylus cantonensis. Mol Biochem Parasitol. 179(1):47-50

(4)
Ma L, Chen K, Meng Q, Liu Q, Tang P, Hu S, Yu J*. (2011) An evolutionary analysis of trypanosomatid GP63 proteases. Parasitol Res. 109(4):1075-1084
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